
#!/bin/sh
if [ ! "$SAS_ODFDIR" ]; then
echo ""
echo "Please set the SAS_ODFDIR environment variable to point at the directory"
echo "containing the ODF files for this observation."
echo ""
exit 1
fi
# # [INFO] [2024-11-30T23:35:12] Module name: VerifyODF
# # [INFO] [2024-11-30T23:35:12] Instrument: all
# # [INFO] [2024-11-30T23:35:12] Stream no.: 0001
# # [INFO] [2024-11-30T23:35:12] Module version number: 1.18
# # [INFO] [2024-11-30T23:35:12] Version of odfingest used was 3.33.1
# # [INFO] [2024-11-30T23:35:12] Module name: MakeCIF
# # [INFO] [2024-11-30T23:35:12] Instrument: all
# # [INFO] [2024-11-30T23:35:12] Stream no.: 0001
# # [INFO] [2024-11-30T23:35:12] Module version number: 1.23
# # [INFO] [2024-11-30T23:35:12] Observation start defined as >2008-01-13T17:42:44.000<
# # [INFO] [2024-11-30T23:35:12] Processing date defined as >2024-12-01T00:35:12<
# [COMMAND] [2024-11-30T23:35:12]
export SAS_MEMORY_MODEL=high
# [COMMAND] [2024-11-30T23:35:12]
export SAS_RAND_SEED=0500750201
# # [INFO] [2024-11-30T23:35:12] ## DEBUG ModuleResources: SAS_RAND_SEED set: 0500750201
# [COMMAND] [2024-11-30T23:35:12]
cifbuild analysisdate=2024-12-01T00:35:12 calindexset=product/P0500750201OBX000CALIND0000.FIT fullpath=no \
observationdate=2008-01-13T17:42:44.000 withccfpath=no -w 10
# # [OUTPUT] [2024-11-30T23:35:39]
# # [INFO] [2024-11-30T23:35:39] Task Run Time cifbuild 27.0093457698822s
#
# [COMMAND] [2024-11-30T23:35:39]
export SAS_MEMORY_MODEL=high
# [COMMAND] [2024-11-30T23:35:39]
export SAS_RAND_SEED=0500750201
# # [INFO] [2024-11-30T23:35:39] ## DEBUG ModuleResources: SAS_RAND_SEED set: 0500750201
# [COMMAND] [2024-11-30T23:35:39]
addattribute attributecomment="\"Telescope (mission) name\" \"DEC of instrument pointing\" \"Observation mode (pointing or slew)\" \
\"Name of observed object\" \"Observation identifier\" \"RA of instrument pointing (degrees)\" \"Date observations were made\" \
\"Date observations ended\" \"Name of PI\"" attributename="TELESCOP DEC_PNT OBS_MODE OBJECT OBS_ID RA_PNT DATE-OBS DATE-END \
OBSERVER" attributetype="string real string string string real string string string" realvalue="-41.3829723 210.831792" \
set=product/P0500750201OBX000CALIND0000.FIT stringvalue="\"XMM\" \"POINTED\" \"NGC 5408 X-1\" \"0500750201\" \
\"2008-01-13T17:42:44.000\" \"2008-01-13T18:41:35.000\" \"Dr Tod Strohmayer\"" -w 10
# # [OUTPUT] [2024-11-30T23:35:39]
# # [INFO] [2024-11-30T23:35:39] Task Run Time addattribute 0.0652101039886475s
#
# [COMMAND] [2024-11-30T23:35:39]
cp /scratch/225466.1.all.q/xmm/ppsprod/228612/product/P0500750201OBX000CALIND0000.FIT \
/scratch/225466.1.all.q/xmm/ppsprod/228612/intermediate/ccf.cif
# # [INFO] [2024-11-30T23:35:39] System RV 0
# # [INFO] [2024-11-30T23:35:39] Module name: GlobalHK
# # [INFO] [2024-11-30T23:35:39] Instrument: all
# # [INFO] [2024-11-30T23:35:39] Stream no.: 0001
# # [INFO] [2024-11-30T23:35:39] Module version number: 1.81
# [COMMAND] [2024-11-30T23:35:39]
export SAS_MEMORY_MODEL=high
# [COMMAND] [2024-11-30T23:35:39]
export SAS_RAND_SEED=0500750201
# # [INFO] [2024-11-30T23:35:39] ## DEBUG ModuleResources: SAS_RAND_SEED set: 0500750201
# [COMMAND] [2024-11-30T23:35:39]
preqgti preqgtifile=intermediate/GlobalHK-all-1-Attitude_GTI-X00000000000000.fits -w 10
# # [OUTPUT] [2024-11-30T23:35:43] ** preqgti::atthkgen: warning (NoAttitude), The attitude was requested for time 316636984.184\
#     which is more than 20 s outside the period for which the attitude is known (closest time is 21 s away).
# ** preqgti::atthkgen: warning (NoAttitude), The attitude was requested for time 316636984.184 which is more than 20 s outside the\
#     period for which the attitude is known (closest time is 21 s away).
# ** preqgti::atthkgen: warning (NoAttitude), The attitude was requested for time 316636985.184 which is more than 20 s outside the\
#     period for which the attitude is known (closest time is 21 s away).
# ** preqgti::atthkgen: warning (NoAttitude), The attitude was requested for time 316636985.184 which is more than 20 s outside the\
#     period for which the attitude is known (closest time is 21 s away).
# ** preqgti::atthkgen: warning (NoAttitude), The attitude was requested for time 316636986.184 which is more than 20 s outside the\
#     period for which the attitude is known (closest time is 21 s away).
# ** preqgti::atthkgen: warning (NoAttitude), The attitude was requested for time 316636986.184 which is more than 20 s outside the\
#     period for which the attitude is known (closest time is 21 s away).
# ** preqgti::atthkgen: warning (NoAttitude), The attitude was requested for time 316636987.184 which is more than 20 s outside the\
#     period for which the attitude is known (closest time is 21 s away).
# ** preqgti::atthkgen: warning (NoAttitude), The attitude was requested for time 316636987.184 which is more than 20 s outside the\
#     period for which the attitude is known (closest time is 21 s away).
# ** preqgti::atthkgen: warning (NoAttitude), The attitude was requested for time 316636988.184 which is more than 20 s outside the\
#     period for which the attitude is known (closest time is 22 s away).
# ** preqgti::atthkgen: warning (NoAttitude), The attitude was requested for time 316636988.184 which is more than 20 s outside the\
#     period for which the attitude is known (closest time is 22 s away).
# ** preqgti: warning (SummaryOfWarnings), 
# warning NoAttitude silently occurred 241678 times 
# # [INFO] [2024-11-30T23:35:43] Task Run Time preqgti 4.36336612701416s
#
# [COMMAND] [2024-11-30T23:35:43]
export SAS_MEMORY_MODEL=high
# [COMMAND] [2024-11-30T23:35:43]
export SAS_RAND_SEED=0500750201
# # [INFO] [2024-11-30T23:35:43] ## DEBUG ModuleResources: SAS_RAND_SEED set: 0500750201
# [COMMAND] [2024-11-30T23:35:43]
atthkgen atthkset=product/P0500750201OBX000ATTTSR0000.FIT preqgtifile=intermediate/GlobalHK-all-1-Attitude_GTI-X00000000000000.fits \
timestep=1 withpreqgti=no -w 10
# # [OUTPUT] [2024-11-30T23:35:44]
# # [INFO] [2024-11-30T23:35:44] Task Run Time atthkgen 0.161714792251587s
#
# [COMMAND] [2024-11-30T23:35:44]
export SAS_MEMORY_MODEL=high
# [COMMAND] [2024-11-30T23:35:44]
export SAS_RAND_SEED=0500750201
# # [INFO] [2024-11-30T23:35:44] ## DEBUG ModuleResources: SAS_RAND_SEED set: 0500750201
# [COMMAND] [2024-11-30T23:35:44]
orbit outfile=product/P0500750201OBX000ORBTSR0000.FIT timestep=1 useobsid=yes -w 10
# # [OUTPUT] [2024-11-30T23:35:44] orbit:- Output FITS Orbit timeseries: product/P0500750201OBX000ORBTSR0000.FIT
# orbit:- Binsize (timestep) of output): 1
# orbit:- Use OBSID data or whole orbit? T 
# # [INFO] [2024-11-30T23:35:44] Task Run Time orbit 0.198676109313965s
#
# [COMMAND] [2024-11-30T23:35:44]
export SAS_MEMORY_MODEL=high
# [COMMAND] [2024-11-30T23:35:44]
export SAS_RAND_SEED=0500750201
# # [INFO] [2024-11-30T23:35:44] ## DEBUG ModuleResources: SAS_RAND_SEED set: 0500750201
# [COMMAND] [2024-11-30T23:35:44]
radmonfix output=product/P0500750201OBX000RADMON0000.FIT radmonlist="odf/1483_0500750201_RMX00100ECX.FIT \
odf/1483_0500750201_RMX00200ECX.FIT" withoutputfile=yes -w 10
# # [OUTPUT] [2024-11-30T23:35:44] ** radmonfix: warning (Extrapolation), Evaluating OBT-MET fit polynomial at x=237868129.9 which\
#     is outside the time correlation data abscissa range [237869018.9, 237874497.5] - result of extrapolation might be afflicted\
#     with large numerical uncertainty.
# ** radmonfix: warning (Extrapolation), Evaluating OBT-MET fit polynomial at x=237868133.9 which is outside the time correlation\
#     data abscissa range [237869018.9, 237874497.5] - result of extrapolation might be afflicted with large numerical uncertainty.
# ** radmonfix: warning (Extrapolation), Evaluating OBT-MET fit polynomial at x=237868137.9 which is outside the time correlation\
#     data abscissa range [237869018.9, 237874497.5] - result of extrapolation might be afflicted with large numerical uncertainty.
# ** radmonfix: warning (Extrapolation), Evaluating OBT-MET fit polynomial at x=237868141.9 which is outside the time correlation\
#     data abscissa range [237869018.9, 237874497.5] - result of extrapolation might be afflicted with large numerical uncertainty.
# ** radmonfix: warning (Extrapolation), Evaluating OBT-MET fit polynomial at x=237868145.9 which is outside the time correlation\
#     data abscissa range [237869018.9, 237874497.5] - result of extrapolation might be afflicted with large numerical uncertainty.
# ** radmonfix: warning (Extrapolation), Evaluating OBT-MET fit polynomial at x=237868149.9 which is outside the time correlation\
#     data abscissa range [237869018.9, 237874497.5] - result of extrapolation might be afflicted with large numerical uncertainty.
# ** radmonfix: warning (Extrapolation), Evaluating OBT-MET fit polynomial at x=237868153.9 which is outside the time correlation\
#     data abscissa range [237869018.9, 237874497.5] - result of extrapolation might be afflicted with large numerical uncertainty.
# ** radmonfix: warning (Extrapolation), Evaluating OBT-MET fit polynomial at x=237868157.9 which is outside the time correlation\
#     data abscissa range [237869018.9, 237874497.5] - result of extrapolation might be afflicted with large numerical uncertainty.
# ** radmonfix: warning (Extrapolation), Evaluating OBT-MET fit polynomial at x=237868161.9 which is outside the time correlation\
#     data abscissa range [237869018.9, 237874497.5] - result of extrapolation might be afflicted with large numerical uncertainty.
# ** radmonfix: warning (Extrapolation), Evaluating OBT-MET fit polynomial at x=237868165.9 which is outside the time correlation\
#     data abscissa range [237869018.9, 237874497.5] - result of extrapolation might be afflicted with large numerical uncertainty.
# radmonfix:- Adding 1438 counts rows from row 295
# radmonfix:- Setting DATE-END...
# ** radmonfix: warning (SummaryOfWarnings), 
# warning Extrapolation silently occurred 402 times 
# # [INFO] [2024-11-30T23:35:44] Task Run Time radmonfix 0.118009805679321s
#
# [COMMAND] [2024-11-30T23:35:44]
cp /lhome/jperea/ppsdev/pcms3/src/pipeline/etc/EPICModes.fits \
/scratch/225466.1.all.q/xmm/ppsprod/228612/intermediate/GlobalHK-all-1-Observing_modes_Pileup_and_OoT_data-X00000000000000.fits
# # [INFO] [2024-11-30T23:35:44] System RV 0
# # [INFO] [2024-11-30T23:35:44] Copied EPIC Observing modes table, Pileup data and OoT data table in place
# [COMMAND] [2024-11-30T23:35:44]
cp /lhome/jperea/ppsdev/pcms3/src/pipeline/etc/ecfs.fits \
/scratch/225466.1.all.q/xmm/ppsprod/228612/intermediate/GlobalHK-all-1-Energy_Conversion_Factors-X00000000000000.fits
# # [INFO] [2024-11-30T23:35:44] System RV 0
# [COMMAND] [2024-11-30T23:35:44]
cp /lhome/jperea/ppsdev/pcms3/src/pipeline/etc/ecfgrid.fits.gz \
/scratch/225466.1.all.q/xmm/ppsprod/228612/intermediate/GlobalHK-all-1-Energy_Conversion_Factors_Grid-X00000000000000.fits
# # [INFO] [2024-11-30T23:35:44] System RV 0
# [COMMAND] [2024-11-30T23:35:44]
cp /lhome/jperea/ppsdev/pcms3/src/pipeline/etc/fluxgrid.fits.gz \
/scratch/225466.1.all.q/xmm/ppsprod/228612/intermediate/GlobalHK-all-1-Flux_Grid-X00000000000000.fits
# # [INFO] [2024-11-30T23:35:44] System RV 0
# # [INFO] [2024-11-30T23:35:44] Module name: ExpChooser
# # [INFO] [2024-11-30T23:35:44] Instrument: emos1
# # [INFO] [2024-11-30T23:35:44] Stream no.: 0001
# # [INFO] [2024-11-30T23:35:44] Module version number: 1.38
# # [INFO] [2024-11-30T23:35:44] Checking exposure S003 for processability
# # [INFO] [2024-11-30T23:35:44] Filter: CalClosed
# # [INFO] [2024-11-30T23:35:44] Instrument mode: PrimeFullWindow
# # [INFO] [2024-11-30T23:35:44] Exposure duration: 3522
# # [INFO] [2024-11-30T23:35:44] Exposure ignored due to invalid or unsupported filter
# # [INFO] [2024-11-30T23:35:44] Module name: ExpChooser
# # [INFO] [2024-11-30T23:35:44] Instrument: emos2
# # [INFO] [2024-11-30T23:35:44] Stream no.: 0001
# # [INFO] [2024-11-30T23:35:44] Module version number: 1.38
# # [INFO] [2024-11-30T23:35:44] Checking exposure S004 for processability
# # [INFO] [2024-11-30T23:35:44] Filter: CalClosed
# # [INFO] [2024-11-30T23:35:44] Instrument mode: PrimeFullWindow
# # [INFO] [2024-11-30T23:35:44] Exposure duration: 3531
# # [INFO] [2024-11-30T23:35:44] Exposure ignored due to invalid or unsupported filter
