
#!/bin/sh
if [ ! "$SAS_ODFDIR" ]; then
echo ""
echo "Please set the SAS_ODFDIR environment variable to point at the directory"
echo "containing the ODF files for this observation."
echo ""
exit 1
fi
# # [INFO] [2024-11-30T23:53:50] Module name: VerifyODF
# # [INFO] [2024-11-30T23:53:50] Instrument: all
# # [INFO] [2024-11-30T23:53:50] Stream no.: 0001
# # [INFO] [2024-11-30T23:53:50] Module version number: 1.18
# # [INFO] [2024-11-30T23:53:50] Version of odfingest used was 3.33.1
# # [INFO] [2024-11-30T23:53:50] Module name: MakeCIF
# # [INFO] [2024-11-30T23:53:50] Instrument: all
# # [INFO] [2024-11-30T23:53:50] Stream no.: 0001
# # [INFO] [2024-11-30T23:53:50] Module version number: 1.23
# # [INFO] [2024-11-30T23:53:50] Observation start defined as >2007-07-29T16:31:40.000<
# # [INFO] [2024-11-30T23:53:50] Processing date defined as >2024-12-01T00:53:50<
# [COMMAND] [2024-11-30T23:53:50]
export SAS_MEMORY_MODEL=high
# [COMMAND] [2024-11-30T23:53:50]
export SAS_RAND_SEED=0504810501
# # [INFO] [2024-11-30T23:53:50] ## DEBUG ModuleResources: SAS_RAND_SEED set: 0504810501
# [COMMAND] [2024-11-30T23:53:50]
cifbuild analysisdate=2024-12-01T00:53:50 calindexset=product/P0504810501OBX000CALIND0000.FIT fullpath=no \
observationdate=2007-07-29T16:31:40.000 withccfpath=no -w 10
# # [OUTPUT] [2024-11-30T23:54:20]
# # [INFO] [2024-11-30T23:54:20] Task Run Time cifbuild 29.9799799919128s
#
# [COMMAND] [2024-11-30T23:54:20]
export SAS_MEMORY_MODEL=high
# [COMMAND] [2024-11-30T23:54:20]
export SAS_RAND_SEED=0504810501
# # [INFO] [2024-11-30T23:54:20] ## DEBUG ModuleResources: SAS_RAND_SEED set: 0504810501
# [COMMAND] [2024-11-30T23:54:20]
addattribute attributecomment="\"Telescope (mission) name\" \"Name of PI\" \"Name of observed object\" \"Date observations were \
made\" \"Observation mode (pointing or slew)\" \"RA of instrument pointing (degrees)\" \"Date observations ended\" \"DEC of \
instrument pointing\" \"Observation identifier\"" attributename="TELESCOP OBSERVER OBJECT DATE-OBS OBS_MODE RA_PNT DATE-END DEC_PNT \
OBS_ID" attributetype="string string string string string real string real string" realvalue="221.5732095 -62.2996111" \
set=product/P0504810501OBX000CALIND0000.FIT stringvalue="\"XMM\" \"Dr Jacco Vink\" \"RCW 86 NE\" \"2007-07-29T16:31:40.000\" \
\"POINTED\" \"2007-07-29T18:48:47.000\" \"0504810501\"" -w 10
# # [OUTPUT] [2024-11-30T23:54:29]
# # [INFO] [2024-11-30T23:54:29] Task Run Time addattribute 8.48139500617981s
#
# [COMMAND] [2024-11-30T23:54:29]
cp /scratch/226662.1.all.q/xmm/ppsprod/229807/product/P0504810501OBX000CALIND0000.FIT \
/scratch/226662.1.all.q/xmm/ppsprod/229807/intermediate/ccf.cif
# # [INFO] [2024-11-30T23:54:29] System RV 0
# # [INFO] [2024-11-30T23:54:35] Module name: GlobalHK
# # [INFO] [2024-11-30T23:54:35] Instrument: all
# # [INFO] [2024-11-30T23:54:35] Stream no.: 0001
# # [INFO] [2024-11-30T23:54:35] Module version number: 1.81
# [COMMAND] [2024-11-30T23:54:35]
export SAS_MEMORY_MODEL=high
# [COMMAND] [2024-11-30T23:54:35]
export SAS_RAND_SEED=0504810501
# # [INFO] [2024-11-30T23:54:35] ## DEBUG ModuleResources: SAS_RAND_SEED set: 0504810501
# [COMMAND] [2024-11-30T23:54:35]
preqgti preqgtifile=intermediate/GlobalHK-all-1-Attitude_GTI-X00000000000000.fits -w 10
# # [OUTPUT] [2024-11-30T23:54:35]
# # [INFO] [2024-11-30T23:54:35] Task Run Time preqgti 0.431229829788208s
#
# [COMMAND] [2024-11-30T23:54:35]
export SAS_MEMORY_MODEL=high
# [COMMAND] [2024-11-30T23:54:35]
export SAS_RAND_SEED=0504810501
# # [INFO] [2024-11-30T23:54:35] ## DEBUG ModuleResources: SAS_RAND_SEED set: 0504810501
# [COMMAND] [2024-11-30T23:54:35]
atthkgen atthkset=product/P0504810501OBX000ATTTSR0000.FIT preqgtifile=intermediate/GlobalHK-all-1-Attitude_GTI-X00000000000000.fits \
timestep=1 withpreqgti=no -w 10
# # [OUTPUT] [2024-11-30T23:54:35]
# # [INFO] [2024-11-30T23:54:35] Task Run Time atthkgen 0.234472990036011s
#
# [COMMAND] [2024-11-30T23:54:35]
export SAS_MEMORY_MODEL=high
# [COMMAND] [2024-11-30T23:54:35]
export SAS_RAND_SEED=0504810501
# # [INFO] [2024-11-30T23:54:35] ## DEBUG ModuleResources: SAS_RAND_SEED set: 0504810501
# [COMMAND] [2024-11-30T23:54:35]
orbit outfile=product/P0504810501OBX000ORBTSR0000.FIT timestep=1 useobsid=yes -w 10
# # [OUTPUT] [2024-11-30T23:54:35] orbit:- Output FITS Orbit timeseries: product/P0504810501OBX000ORBTSR0000.FIT
# orbit:- Binsize (timestep) of output): 1
# orbit:- Use OBSID data or whole orbit? T 
# # [INFO] [2024-11-30T23:54:35] Task Run Time orbit 0.288058996200562s
#
# [COMMAND] [2024-11-30T23:54:35]
export SAS_MEMORY_MODEL=high
# [COMMAND] [2024-11-30T23:54:35]
export SAS_RAND_SEED=0504810501
# # [INFO] [2024-11-30T23:54:35] ## DEBUG ModuleResources: SAS_RAND_SEED set: 0504810501
# [COMMAND] [2024-11-30T23:54:35]
radmonfix output=product/P0504810501OBX000RADMON0000.FIT radmonlist="odf/1398_0504810501_RMX00100ECX.FIT \
odf/1398_0504810501_RMX00200ECX.FIT" withoutputfile=yes -w 10
# # [OUTPUT] [2024-11-30T23:54:36] ** radmonfix: warning (Extrapolation), Evaluating OBT-MET fit polynomial at x=223359765.9 which\
#     is outside the time correlation data abscissa range [223349680.9, 223359662.6] - result of extrapolation might be afflicted\
#     with large numerical uncertainty.
# ** radmonfix: warning (Extrapolation), Evaluating OBT-MET fit polynomial at x=223359769.9 which is outside the time correlation\
#     data abscissa range [223349680.9, 223359662.6] - result of extrapolation might be afflicted with large numerical uncertainty.
# ** radmonfix: warning (Extrapolation), Evaluating OBT-MET fit polynomial at x=223359773.9 which is outside the time correlation\
#     data abscissa range [223349680.9, 223359662.6] - result of extrapolation might be afflicted with large numerical uncertainty.
# ** radmonfix: warning (Extrapolation), Evaluating OBT-MET fit polynomial at x=223359777.9 which is outside the time correlation\
#     data abscissa range [223349680.9, 223359662.6] - result of extrapolation might be afflicted with large numerical uncertainty.
# ** radmonfix: warning (Extrapolation), Evaluating OBT-MET fit polynomial at x=223359781.9 which is outside the time correlation\
#     data abscissa range [223349680.9, 223359662.6] - result of extrapolation might be afflicted with large numerical uncertainty.
# ** radmonfix: warning (Extrapolation), Evaluating OBT-MET fit polynomial at x=223359785.9 which is outside the time correlation\
#     data abscissa range [223349680.9, 223359662.6] - result of extrapolation might be afflicted with large numerical uncertainty.
# ** radmonfix: warning (Extrapolation), Evaluating OBT-MET fit polynomial at x=223359789.9 which is outside the time correlation\
#     data abscissa range [223349680.9, 223359662.6] - result of extrapolation might be afflicted with large numerical uncertainty.
# ** radmonfix: warning (Extrapolation), Evaluating OBT-MET fit polynomial at x=223359793.9 which is outside the time correlation\
#     data abscissa range [223349680.9, 223359662.6] - result of extrapolation might be afflicted with large numerical uncertainty.
# ** radmonfix: warning (Extrapolation), Evaluating OBT-MET fit polynomial at x=223359797.9 which is outside the time correlation\
#     data abscissa range [223349680.9, 223359662.6] - result of extrapolation might be afflicted with large numerical uncertainty.
# ** radmonfix: warning (Extrapolation), Evaluating OBT-MET fit polynomial at x=223359801.9 which is outside the time correlation\
#     data abscissa range [223349680.9, 223359662.6] - result of extrapolation might be afflicted with large numerical uncertainty.
# radmonfix:- Adding 1204 counts rows from row 1402
# radmonfix:- Setting DATE-END...
# ** radmonfix: warning (SummaryOfWarnings), 
# warning Extrapolation silently occurred 57 times 
# # [INFO] [2024-11-30T23:54:36] Task Run Time radmonfix 0.10686993598938s
#
# [COMMAND] [2024-11-30T23:54:36]
cp /lhome/jperea/ppsdev/pcms3/src/pipeline/etc/EPICModes.fits \
/scratch/226662.1.all.q/xmm/ppsprod/229807/intermediate/GlobalHK-all-1-Observing_modes_Pileup_and_OoT_data-X00000000000000.fits
# # [INFO] [2024-11-30T23:54:36] System RV 0
# # [INFO] [2024-11-30T23:54:36] Copied EPIC Observing modes table, Pileup data and OoT data table in place
# [COMMAND] [2024-11-30T23:54:36]
cp /lhome/jperea/ppsdev/pcms3/src/pipeline/etc/ecfs.fits \
/scratch/226662.1.all.q/xmm/ppsprod/229807/intermediate/GlobalHK-all-1-Energy_Conversion_Factors-X00000000000000.fits
# # [INFO] [2024-11-30T23:54:36] System RV 0
# [COMMAND] [2024-11-30T23:54:36]
cp /lhome/jperea/ppsdev/pcms3/src/pipeline/etc/ecfgrid.fits.gz \
/scratch/226662.1.all.q/xmm/ppsprod/229807/intermediate/GlobalHK-all-1-Energy_Conversion_Factors_Grid-X00000000000000.fits
# # [INFO] [2024-11-30T23:54:36] System RV 0
# [COMMAND] [2024-11-30T23:54:36]
cp /lhome/jperea/ppsdev/pcms3/src/pipeline/etc/fluxgrid.fits.gz \
/scratch/226662.1.all.q/xmm/ppsprod/229807/intermediate/GlobalHK-all-1-Flux_Grid-X00000000000000.fits
# # [INFO] [2024-11-30T23:54:36] System RV 0
# # [INFO] [2024-11-30T23:54:36] Module name: ExpChooser
# # [INFO] [2024-11-30T23:54:36] Instrument: emos1
# # [INFO] [2024-11-30T23:54:36] Stream no.: 0001
# # [INFO] [2024-11-30T23:54:36] Module version number: 1.38
# # [INFO] [2024-11-30T23:54:36] Checking exposure S003 for processability
# # [INFO] [2024-11-30T23:54:36] Filter: CalClosed
# # [INFO] [2024-11-30T23:54:36] Instrument mode: PrimeFullWindow
# # [INFO] [2024-11-30T23:54:36] Exposure duration: 8021
# # [INFO] [2024-11-30T23:54:36] Exposure ignored due to invalid or unsupported filter
# # [INFO] [2024-11-30T23:54:36] Module name: ExpChooser
# # [INFO] [2024-11-30T23:54:36] Instrument: emos2
# # [INFO] [2024-11-30T23:54:36] Stream no.: 0001
# # [INFO] [2024-11-30T23:54:36] Module version number: 1.38
# # [INFO] [2024-11-30T23:54:36] Checking exposure S004 for processability
# # [INFO] [2024-11-30T23:54:36] Filter: CalClosed
# # [INFO] [2024-11-30T23:54:36] Instrument mode: PrimeFullWindow
# # [INFO] [2024-11-30T23:54:36] Exposure duration: 8034
# # [INFO] [2024-11-30T23:54:36] Exposure ignored due to invalid or unsupported filter
# # [INFO] [2024-11-30T23:54:36] Module name: ExpChooser
# # [INFO] [2024-11-30T23:54:36] Instrument: epn
# # [INFO] [2024-11-30T23:54:36] Stream no.: 0001
# # [INFO] [2024-11-30T23:54:36] Module version number: 1.38
# # [INFO] [2024-11-30T23:54:36] Checking exposure S005 for processability
# # [INFO] [2024-11-30T23:54:36] Filter: CalClosed
# # [INFO] [2024-11-30T23:54:36] Instrument mode: PrimeFullWindow
# # [INFO] [2024-11-30T23:54:36] Exposure duration: 6437
# # [INFO] [2024-11-30T23:54:36] Exposure ignored due to invalid or unsupported filter
# # [INFO] [2024-11-30T23:54:36] Module name: ExpChooser
# # [INFO] [2024-11-30T23:54:36] Instrument: epn
# # [INFO] [2024-11-30T23:54:36] Stream no.: 0002
# # [INFO] [2024-11-30T23:54:36] Module version number: 1.38
# # [INFO] [2024-11-30T23:54:36] Checking exposure U002 for processability
# # [INFO] [2024-11-30T23:54:36] Exposure ignored due to lack of event files
# # [INFO] [2024-11-30T23:54:36] Module name: ExpChooser
# # [INFO] [2024-11-30T23:54:36] Instrument: epn
# # [INFO] [2024-11-30T23:54:36] Stream no.: 0003
# # [INFO] [2024-11-30T23:54:36] Module version number: 1.38
# # [INFO] [2024-11-30T23:54:36] Checking exposure U003 for processability
# # [INFO] [2024-11-30T23:54:36] Exposure ignored due to lack of event files
# # [INFO] [2024-11-30T23:54:36] Module name: ExpChooser
# # [INFO] [2024-11-30T23:54:36] Instrument: epn
# # [INFO] [2024-11-30T23:54:36] Stream no.: 0004
# # [INFO] [2024-11-30T23:54:36] Module version number: 1.38
# # [INFO] [2024-11-30T23:54:36] Checking exposure U004 for processability
# # [INFO] [2024-11-30T23:54:36] Exposure ignored due to lack of event files
# # [INFO] [2024-11-30T23:54:36] Module name: ExpChooser
# # [INFO] [2024-11-30T23:54:36] Instrument: epn
# # [INFO] [2024-11-30T23:54:36] Stream no.: 0005
# # [INFO] [2024-11-30T23:54:36] Module version number: 1.38
# # [INFO] [2024-11-30T23:54:36] Checking exposure U005 for processability
# # [INFO] [2024-11-30T23:54:36] Exposure ignored due to lack of event files
# # [INFO] [2024-11-30T23:54:36] Module name: ExpChooser
# # [INFO] [2024-11-30T23:54:36] Instrument: epn
# # [INFO] [2024-11-30T23:54:36] Stream no.: 0006
# # [INFO] [2024-11-30T23:54:36] Module version number: 1.38
# # [INFO] [2024-11-30T23:54:36] Checking exposure U006 for processability
# # [INFO] [2024-11-30T23:54:36] Exposure ignored due to lack of event files
# # [INFO] [2024-11-30T23:54:36] Module name: ExpChooser
# # [INFO] [2024-11-30T23:54:36] Instrument: epn
# # [INFO] [2024-11-30T23:54:36] Stream no.: 0007
# # [INFO] [2024-11-30T23:54:36] Module version number: 1.38
# # [INFO] [2024-11-30T23:54:36] Checking exposure U007 for processability
# # [INFO] [2024-11-30T23:54:36] Exposure ignored due to lack of event files
# # [INFO] [2024-11-30T23:54:36] Module name: ExpChooser
# # [INFO] [2024-11-30T23:54:36] Instrument: epn
# # [INFO] [2024-11-30T23:54:36] Stream no.: 0008
# # [INFO] [2024-11-30T23:54:36] Module version number: 1.38
# # [INFO] [2024-11-30T23:54:36] Checking exposure U008 for processability
# # [INFO] [2024-11-30T23:54:36] Exposure ignored due to lack of event files
# # [INFO] [2024-11-30T23:54:36] Module name: ExpChooser
# # [INFO] [2024-11-30T23:54:36] Instrument: epn
# # [INFO] [2024-11-30T23:54:36] Stream no.: 0009
# # [INFO] [2024-11-30T23:54:36] Module version number: 1.38
# # [INFO] [2024-11-30T23:54:36] Checking exposure U009 for processability
# # [INFO] [2024-11-30T23:54:36] Exposure ignored due to lack of event files
# # [INFO] [2024-11-30T23:54:36] Module name: ExpChooser
# # [INFO] [2024-11-30T23:54:36] Instrument: epn
# # [INFO] [2024-11-30T23:54:36] Stream no.: 0010
# # [INFO] [2024-11-30T23:54:36] Module version number: 1.38
# # [INFO] [2024-11-30T23:54:36] Checking exposure U010 for processability
# # [INFO] [2024-11-30T23:54:36] Exposure ignored due to lack of event files
# # [INFO] [2024-11-30T23:54:36] Module name: ExpChooser
# # [INFO] [2024-11-30T23:54:36] Instrument: epn
# # [INFO] [2024-11-30T23:54:36] Stream no.: 0011
# # [INFO] [2024-11-30T23:54:36] Module version number: 1.38
# # [INFO] [2024-11-30T23:54:36] Checking exposure U011 for processability
# # [INFO] [2024-11-30T23:54:36] Exposure ignored due to lack of event files
# # [INFO] [2024-11-30T23:54:36] Module name: ExpChooser
# # [INFO] [2024-11-30T23:54:36] Instrument: epn
# # [INFO] [2024-11-30T23:54:36] Stream no.: 0012
# # [INFO] [2024-11-30T23:54:36] Module version number: 1.38
# # [INFO] [2024-11-30T23:54:36] Checking exposure U012 for processability
# # [INFO] [2024-11-30T23:54:36] Exposure ignored due to lack of event files
# # [INFO] [2024-11-30T23:54:36] Module name: ExpChooser
# # [INFO] [2024-11-30T23:54:36] Instrument: epn
# # [INFO] [2024-11-30T23:54:36] Stream no.: 0013
# # [INFO] [2024-11-30T23:54:36] Module version number: 1.38
# # [INFO] [2024-11-30T23:54:36] Checking exposure U013 for processability
# # [INFO] [2024-11-30T23:54:36] Exposure ignored due to lack of event files
# # [INFO] [2024-11-30T23:54:36] Module name: ExpChooser
# # [INFO] [2024-11-30T23:54:36] Instrument: epn
# # [INFO] [2024-11-30T23:54:36] Stream no.: 0014
# # [INFO] [2024-11-30T23:54:36] Module version number: 1.38
# # [INFO] [2024-11-30T23:54:36] Checking exposure U501 for processability
# # [INFO] [2024-11-30T23:54:36] Exposure ignored due to lack of event files
# # [INFO] [2024-11-30T23:54:36] Module name: ExpChooser
# # [INFO] [2024-11-30T23:54:36] Instrument: om
# # [INFO] [2024-11-30T23:54:36] Stream no.: 0001
# # [INFO] [2024-11-30T23:54:36] Module version number: 1.38
# # [INFO] [2024-11-30T23:54:36] Checking exposure S006 for processability
# # [INFO] [2024-11-30T23:54:36] Filter: Blocked
# # [INFO] [2024-11-30T23:54:36] Instrument mode: DarkLow
# # [INFO] [2024-11-30T23:54:36] Exposure duration: 5000
# # [INFO] [2024-11-30T23:54:36] Exposure ignored due to invalid or unsupported filter
