
#!/bin/sh
if [ ! "$SAS_ODFDIR" ]; then
echo ""
echo "Please set the SAS_ODFDIR environment variable to point at the directory"
echo "containing the ODF files for this observation."
echo ""
exit 1
fi
# # [INFO] [2024-11-30T23:33:30] Module name: VerifyODF
# # [INFO] [2024-11-30T23:33:30] Instrument: all
# # [INFO] [2024-11-30T23:33:30] Stream no.: 0001
# # [INFO] [2024-11-30T23:33:30] Module version number: 1.18
# # [INFO] [2024-11-30T23:33:30] Version of odfingest used was 3.33.1
# # [INFO] [2024-11-30T23:33:30] Module name: MakeCIF
# # [INFO] [2024-11-30T23:33:30] Instrument: all
# # [INFO] [2024-11-30T23:33:30] Stream no.: 0001
# # [INFO] [2024-11-30T23:33:30] Module version number: 1.23
# # [INFO] [2024-11-30T23:33:30] Observation start defined as >2009-04-18T10:20:36.000<
# # [INFO] [2024-11-30T23:33:30] Processing date defined as >2024-12-01T00:33:30<
# [COMMAND] [2024-11-30T23:33:30]
export SAS_MEMORY_MODEL=high
# [COMMAND] [2024-11-30T23:33:30]
export SAS_RAND_SEED=0555410201
# # [INFO] [2024-11-30T23:33:30] ## DEBUG ModuleResources: SAS_RAND_SEED set: 0555410201
# [COMMAND] [2024-11-30T23:33:30]
cifbuild analysisdate=2024-12-01T00:33:30 calindexset=product/P0555410201OBX000CALIND0000.FIT fullpath=no \
observationdate=2009-04-18T10:20:36.000 withccfpath=no -w 10
# # [OUTPUT] [2024-11-30T23:33:58]
# # [INFO] [2024-11-30T23:33:58] Task Run Time cifbuild 27.3428049087524s
#
# [COMMAND] [2024-11-30T23:33:58]
export SAS_MEMORY_MODEL=high
# [COMMAND] [2024-11-30T23:33:58]
export SAS_RAND_SEED=0555410201
# # [INFO] [2024-11-30T23:33:58] ## DEBUG ModuleResources: SAS_RAND_SEED set: 0555410201
# [COMMAND] [2024-11-30T23:33:58]
addattribute attributecomment="\"Telescope (mission) name\" \"RA of instrument pointing (degrees)\" \"Observation mode (pointing or \
slew)\" \"Name of observed object\" \"Name of PI\" \"Date observations were made\" \"DEC of instrument pointing\" \"Observation \
identifier\" \"Date observations ended\"" attributename="TELESCOP RA_PNT OBS_MODE OBJECT OBSERVER DATE-OBS DEC_PNT OBS_ID DATE-END" \
attributetype="string real string string string string real string string" realvalue="\"287.407917\" \"9.8302778\"" \
set=product/P0555410201OBX000CALIND0000.FIT stringvalue="\"XMM\" \"POINTED\" \"4U 1907+09\" \"Prof Solen Balman\" \
\"2009-04-18T10:20:36.000\" \"0555410201\" \"2009-04-18T11:37:45.000\"" -w 10
# # [OUTPUT] [2024-11-30T23:33:58]
# # [INFO] [2024-11-30T23:33:58] Task Run Time addattribute 0.0340099334716797s
#
# [COMMAND] [2024-11-30T23:33:58]
cp /scratch/225425.1.all.q/xmm/ppsprod/228571/product/P0555410201OBX000CALIND0000.FIT \
/scratch/225425.1.all.q/xmm/ppsprod/228571/intermediate/ccf.cif
# # [INFO] [2024-11-30T23:33:58] System RV 0
# # [INFO] [2024-11-30T23:33:58] Module name: GlobalHK
# # [INFO] [2024-11-30T23:33:58] Instrument: all
# # [INFO] [2024-11-30T23:33:58] Stream no.: 0001
# # [INFO] [2024-11-30T23:33:58] Module version number: 1.81
# [COMMAND] [2024-11-30T23:33:58]
export SAS_MEMORY_MODEL=high
# [COMMAND] [2024-11-30T23:33:58]
export SAS_RAND_SEED=0555410201
# # [INFO] [2024-11-30T23:33:58] ## DEBUG ModuleResources: SAS_RAND_SEED set: 0555410201
# [COMMAND] [2024-11-30T23:33:58]
preqgti preqgtifile=intermediate/GlobalHK-all-1-Attitude_GTI-X00000000000000.fits -w 10
# # [OUTPUT] [2024-11-30T23:33:59] ** preqgti::atthkgen: warning (NoAttitude), The attitude was requested for time 356442654.184\
#     which is more than 20 s outside the period for which the attitude is known (closest time is 20.9999999404 s away).
# ** preqgti::atthkgen: warning (NoAttitude), The attitude was requested for time 356442654.184 which is more than 20 s outside the\
#     period for which the attitude is known (closest time is 20.9999999404 s away).
# ** preqgti::atthkgen: warning (NoAttitude), The attitude was requested for time 356442655.184 which is more than 20 s outside the\
#     period for which the attitude is known (closest time is 20.9999999404 s away).
# ** preqgti::atthkgen: warning (NoAttitude), The attitude was requested for time 356442655.184 which is more than 20 s outside the\
#     period for which the attitude is known (closest time is 20.9999999404 s away).
# ** preqgti::atthkgen: warning (NoAttitude), The attitude was requested for time 356442656.184 which is more than 20 s outside the\
#     period for which the attitude is known (closest time is 20.9999999404 s away).
# ** preqgti::atthkgen: warning (NoAttitude), The attitude was requested for time 356442656.184 which is more than 20 s outside the\
#     period for which the attitude is known (closest time is 20.9999999404 s away).
# ** preqgti::atthkgen: warning (NoAttitude), The attitude was requested for time 356442657.184 which is more than 20 s outside the\
#     period for which the attitude is known (closest time is 20.9999999404 s away).
# ** preqgti::atthkgen: warning (NoAttitude), The attitude was requested for time 356442657.184 which is more than 20 s outside the\
#     period for which the attitude is known (closest time is 20.9999999404 s away).
# ** preqgti::atthkgen: warning (NoAttitude), The attitude was requested for time 356442658.184 which is more than 20 s outside the\
#     period for which the attitude is known (closest time is 21.9999999404 s away).
# ** preqgti::atthkgen: warning (NoAttitude), The attitude was requested for time 356442658.184 which is more than 20 s outside the\
#     period for which the attitude is known (closest time is 21.9999999404 s away).
# ** preqgti: warning (SummaryOfWarnings), 
# warning NoAttitude silently occurred 45878 times 
# # [INFO] [2024-11-30T23:33:59] Task Run Time preqgti 1.20383906364441s
#
# [COMMAND] [2024-11-30T23:33:59]
export SAS_MEMORY_MODEL=high
# [COMMAND] [2024-11-30T23:33:59]
export SAS_RAND_SEED=0555410201
# # [INFO] [2024-11-30T23:33:59] ## DEBUG ModuleResources: SAS_RAND_SEED set: 0555410201
# [COMMAND] [2024-11-30T23:33:59]
atthkgen atthkset=product/P0555410201OBX000ATTTSR0000.FIT preqgtifile=intermediate/GlobalHK-all-1-Attitude_GTI-X00000000000000.fits \
timestep=1 withpreqgti=no -w 10
# # [OUTPUT] [2024-11-30T23:33:59]
# # [INFO] [2024-11-30T23:33:59] Task Run Time atthkgen 0.170187950134277s
#
# [COMMAND] [2024-11-30T23:33:59]
export SAS_MEMORY_MODEL=high
# [COMMAND] [2024-11-30T23:33:59]
export SAS_RAND_SEED=0555410201
# # [INFO] [2024-11-30T23:33:59] ## DEBUG ModuleResources: SAS_RAND_SEED set: 0555410201
# [COMMAND] [2024-11-30T23:33:59]
orbit outfile=product/P0555410201OBX000ORBTSR0000.FIT timestep=1 useobsid=yes -w 10
# # [OUTPUT] [2024-11-30T23:33:59] orbit:- Output FITS Orbit timeseries: product/P0555410201OBX000ORBTSR0000.FIT
# orbit:- Binsize (timestep) of output): 1
# orbit:- Use OBSID data or whole orbit? T 
# # [INFO] [2024-11-30T23:33:59] Task Run Time orbit 0.212696075439453s
#
# [COMMAND] [2024-11-30T23:33:59]
export SAS_MEMORY_MODEL=high
# [COMMAND] [2024-11-30T23:33:59]
export SAS_RAND_SEED=0555410201
# # [INFO] [2024-11-30T23:33:59] ## DEBUG ModuleResources: SAS_RAND_SEED set: 0555410201
# [COMMAND] [2024-11-30T23:33:59]
radmonfix output=product/P0555410201OBX000RADMON0000.FIT radmonlist="odf/1714_0555410201_RMX00100ECX.FIT \
odf/1714_0555410201_RMX00200ECX.FIT" withoutputfile=yes -w 10
# # [OUTPUT] [2024-11-30T23:34:00] ** radmonfix: warning (Extrapolation), Evaluating OBT-MET fit polynomial at x=277678973.9 which\
#     is outside the time correlation data abscissa range [277672497.2, 277678871.5] - result of extrapolation might be afflicted\
#     with large numerical uncertainty.
# ** radmonfix: warning (Extrapolation), Evaluating OBT-MET fit polynomial at x=277678977.9 which is outside the time correlation\
#     data abscissa range [277672497.2, 277678871.5] - result of extrapolation might be afflicted with large numerical uncertainty.
# ** radmonfix: warning (Extrapolation), Evaluating OBT-MET fit polynomial at x=277678981.9 which is outside the time correlation\
#     data abscissa range [277672497.2, 277678871.5] - result of extrapolation might be afflicted with large numerical uncertainty.
# ** radmonfix: warning (Extrapolation), Evaluating OBT-MET fit polynomial at x=277678985.9 which is outside the time correlation\
#     data abscissa range [277672497.2, 277678871.5] - result of extrapolation might be afflicted with large numerical uncertainty.
# ** radmonfix: warning (Extrapolation), Evaluating OBT-MET fit polynomial at x=277678989.9 which is outside the time correlation\
#     data abscissa range [277672497.2, 277678871.5] - result of extrapolation might be afflicted with large numerical uncertainty.
# ** radmonfix: warning (Extrapolation), Evaluating OBT-MET fit polynomial at x=277678993.9 which is outside the time correlation\
#     data abscissa range [277672497.2, 277678871.5] - result of extrapolation might be afflicted with large numerical uncertainty.
# ** radmonfix: warning (Extrapolation), Evaluating OBT-MET fit polynomial at x=277678997.9 which is outside the time correlation\
#     data abscissa range [277672497.2, 277678871.5] - result of extrapolation might be afflicted with large numerical uncertainty.
# ** radmonfix: warning (Extrapolation), Evaluating OBT-MET fit polynomial at x=277679001.9 which is outside the time correlation\
#     data abscissa range [277672497.2, 277678871.5] - result of extrapolation might be afflicted with large numerical uncertainty.
# ** radmonfix: warning (Extrapolation), Evaluating OBT-MET fit polynomial at x=277679005.9 which is outside the time correlation\
#     data abscissa range [277672497.2, 277678871.5] - result of extrapolation might be afflicted with large numerical uncertainty.
# ** radmonfix: warning (Extrapolation), Evaluating OBT-MET fit polynomial at x=277679009.9 which is outside the time correlation\
#     data abscissa range [277672497.2, 277678871.5] - result of extrapolation might be afflicted with large numerical uncertainty.
# radmonfix:- Adding 1792 counts rows from row 483
# radmonfix:- Setting DATE-END...
# ** radmonfix: warning (SummaryOfWarnings), 
# warning Extrapolation silently occurred 621 times 
# # [INFO] [2024-11-30T23:34:00] Task Run Time radmonfix 0.129081010818481s
#
# [COMMAND] [2024-11-30T23:34:00]
cp /lhome/jperea/ppsdev/pcms3/src/pipeline/etc/EPICModes.fits \
/scratch/225425.1.all.q/xmm/ppsprod/228571/intermediate/GlobalHK-all-1-Observing_modes_Pileup_and_OoT_data-X00000000000000.fits
# # [INFO] [2024-11-30T23:34:00] System RV 0
# # [INFO] [2024-11-30T23:34:00] Copied EPIC Observing modes table, Pileup data and OoT data table in place
# [COMMAND] [2024-11-30T23:34:00]
cp /lhome/jperea/ppsdev/pcms3/src/pipeline/etc/ecfs.fits \
/scratch/225425.1.all.q/xmm/ppsprod/228571/intermediate/GlobalHK-all-1-Energy_Conversion_Factors-X00000000000000.fits
# # [INFO] [2024-11-30T23:34:00] System RV 0
# [COMMAND] [2024-11-30T23:34:00]
cp /lhome/jperea/ppsdev/pcms3/src/pipeline/etc/ecfgrid.fits.gz \
/scratch/225425.1.all.q/xmm/ppsprod/228571/intermediate/GlobalHK-all-1-Energy_Conversion_Factors_Grid-X00000000000000.fits
# # [INFO] [2024-11-30T23:34:00] System RV 0
# [COMMAND] [2024-11-30T23:34:00]
cp /lhome/jperea/ppsdev/pcms3/src/pipeline/etc/fluxgrid.fits.gz \
/scratch/225425.1.all.q/xmm/ppsprod/228571/intermediate/GlobalHK-all-1-Flux_Grid-X00000000000000.fits
# # [INFO] [2024-11-30T23:34:00] System RV 0
# # [INFO] [2024-11-30T23:34:00] Module name: ExpChooser
# # [INFO] [2024-11-30T23:34:00] Instrument: emos1
# # [INFO] [2024-11-30T23:34:00] Stream no.: 0001
# # [INFO] [2024-11-30T23:34:00] Module version number: 1.38
# # [INFO] [2024-11-30T23:34:00] Checking exposure S001 for processability
# # [INFO] [2024-11-30T23:34:00] Filter: CalClosed
# # [INFO] [2024-11-30T23:34:00] Instrument mode: PrimeFullWindow
# # [INFO] [2024-11-30T23:34:00] Exposure duration: 4424
# # [INFO] [2024-11-30T23:34:00] Exposure ignored due to invalid or unsupported filter
# # [INFO] [2024-11-30T23:34:00] Module name: ExpChooser
# # [INFO] [2024-11-30T23:34:00] Instrument: emos2
# # [INFO] [2024-11-30T23:34:00] Stream no.: 0001
# # [INFO] [2024-11-30T23:34:00] Module version number: 1.38
# # [INFO] [2024-11-30T23:34:00] Checking exposure S002 for processability
# # [INFO] [2024-11-30T23:34:00] Filter: CalClosed
# # [INFO] [2024-11-30T23:34:00] Instrument mode: PrimeFullWindow
# # [INFO] [2024-11-30T23:34:00] Exposure duration: 4427
# # [INFO] [2024-11-30T23:34:00] Exposure ignored due to invalid or unsupported filter
# # [INFO] [2024-11-30T23:34:00] Module name: ExpChooser
# # [INFO] [2024-11-30T23:34:00] Instrument: epn
# # [INFO] [2024-11-30T23:34:00] Stream no.: 0001
# # [INFO] [2024-11-30T23:34:00] Module version number: 1.38
# # [INFO] [2024-11-30T23:34:00] Checking exposure S003 for processability
# # [INFO] [2024-11-30T23:34:00] Filter: CalClosed
# # [INFO] [2024-11-30T23:34:00] Instrument mode: PrimeFullWindow
# # [INFO] [2024-11-30T23:34:00] Exposure duration: 2835
# # [INFO] [2024-11-30T23:34:00] Exposure ignored due to invalid or unsupported filter
# # [INFO] [2024-11-30T23:34:00] Module name: ExpChooser
# # [INFO] [2024-11-30T23:34:00] Instrument: epn
# # [INFO] [2024-11-30T23:34:00] Stream no.: 0002
# # [INFO] [2024-11-30T23:34:00] Module version number: 1.38
# # [INFO] [2024-11-30T23:34:00] Checking exposure U002 for processability
# # [INFO] [2024-11-30T23:34:00] Exposure ignored due to lack of event files
# # [INFO] [2024-11-30T23:34:00] Module name: ExpChooser
# # [INFO] [2024-11-30T23:34:00] Instrument: epn
# # [INFO] [2024-11-30T23:34:00] Stream no.: 0003
# # [INFO] [2024-11-30T23:34:00] Module version number: 1.38
# # [INFO] [2024-11-30T23:34:00] Checking exposure U003 for processability
# # [INFO] [2024-11-30T23:34:00] Exposure ignored due to lack of event files
# # [INFO] [2024-11-30T23:34:00] Module name: ExpChooser
# # [INFO] [2024-11-30T23:34:00] Instrument: epn
# # [INFO] [2024-11-30T23:34:00] Stream no.: 0004
# # [INFO] [2024-11-30T23:34:00] Module version number: 1.38
# # [INFO] [2024-11-30T23:34:00] Checking exposure U004 for processability
# # [INFO] [2024-11-30T23:34:00] Exposure ignored due to lack of event files
# # [INFO] [2024-11-30T23:34:00] Module name: ExpChooser
# # [INFO] [2024-11-30T23:34:00] Instrument: epn
# # [INFO] [2024-11-30T23:34:00] Stream no.: 0005
# # [INFO] [2024-11-30T23:34:00] Module version number: 1.38
# # [INFO] [2024-11-30T23:34:00] Checking exposure U005 for processability
# # [INFO] [2024-11-30T23:34:00] Exposure ignored due to lack of event files
# # [INFO] [2024-11-30T23:34:00] Module name: ExpChooser
# # [INFO] [2024-11-30T23:34:00] Instrument: epn
# # [INFO] [2024-11-30T23:34:00] Stream no.: 0006
# # [INFO] [2024-11-30T23:34:00] Module version number: 1.38
# # [INFO] [2024-11-30T23:34:00] Checking exposure U006 for processability
# # [INFO] [2024-11-30T23:34:00] Exposure ignored due to lack of event files
# # [INFO] [2024-11-30T23:34:00] Module name: ExpChooser
# # [INFO] [2024-11-30T23:34:00] Instrument: epn
# # [INFO] [2024-11-30T23:34:00] Stream no.: 0007
# # [INFO] [2024-11-30T23:34:00] Module version number: 1.38
# # [INFO] [2024-11-30T23:34:00] Checking exposure U007 for processability
# # [INFO] [2024-11-30T23:34:00] Exposure ignored due to lack of event files
# # [INFO] [2024-11-30T23:34:00] Module name: ExpChooser
# # [INFO] [2024-11-30T23:34:00] Instrument: epn
# # [INFO] [2024-11-30T23:34:00] Stream no.: 0008
# # [INFO] [2024-11-30T23:34:00] Module version number: 1.38
# # [INFO] [2024-11-30T23:34:00] Checking exposure U008 for processability
# # [INFO] [2024-11-30T23:34:00] Exposure ignored due to lack of event files
# # [INFO] [2024-11-30T23:34:00] Module name: ExpChooser
# # [INFO] [2024-11-30T23:34:00] Instrument: epn
# # [INFO] [2024-11-30T23:34:00] Stream no.: 0009
# # [INFO] [2024-11-30T23:34:00] Module version number: 1.38
# # [INFO] [2024-11-30T23:34:00] Checking exposure U009 for processability
# # [INFO] [2024-11-30T23:34:00] Exposure ignored due to lack of event files
# # [INFO] [2024-11-30T23:34:00] Module name: ExpChooser
# # [INFO] [2024-11-30T23:34:00] Instrument: epn
# # [INFO] [2024-11-30T23:34:00] Stream no.: 0010
# # [INFO] [2024-11-30T23:34:00] Module version number: 1.38
# # [INFO] [2024-11-30T23:34:00] Checking exposure U010 for processability
# # [INFO] [2024-11-30T23:34:00] Exposure ignored due to lack of event files
# # [INFO] [2024-11-30T23:34:00] Module name: ExpChooser
# # [INFO] [2024-11-30T23:34:00] Instrument: epn
# # [INFO] [2024-11-30T23:34:00] Stream no.: 0011
# # [INFO] [2024-11-30T23:34:00] Module version number: 1.38
# # [INFO] [2024-11-30T23:34:00] Checking exposure U011 for processability
# # [INFO] [2024-11-30T23:34:00] Exposure ignored due to lack of event files
# # [INFO] [2024-11-30T23:34:00] Module name: ExpChooser
# # [INFO] [2024-11-30T23:34:00] Instrument: epn
# # [INFO] [2024-11-30T23:34:00] Stream no.: 0012
# # [INFO] [2024-11-30T23:34:00] Module version number: 1.38
# # [INFO] [2024-11-30T23:34:00] Checking exposure U012 for processability
# # [INFO] [2024-11-30T23:34:00] Exposure ignored due to lack of event files
# # [INFO] [2024-11-30T23:34:00] Module name: ExpChooser
# # [INFO] [2024-11-30T23:34:00] Instrument: epn
# # [INFO] [2024-11-30T23:34:00] Stream no.: 0013
# # [INFO] [2024-11-30T23:34:00] Module version number: 1.38
# # [INFO] [2024-11-30T23:34:00] Checking exposure U013 for processability
# # [INFO] [2024-11-30T23:34:00] Exposure ignored due to lack of event files
# # [INFO] [2024-11-30T23:34:00] Module name: ExpChooser
# # [INFO] [2024-11-30T23:34:00] Instrument: epn
# # [INFO] [2024-11-30T23:34:00] Stream no.: 0014
# # [INFO] [2024-11-30T23:34:00] Module version number: 1.38
# # [INFO] [2024-11-30T23:34:00] Checking exposure U201 for processability
# # [INFO] [2024-11-30T23:34:00] Exposure ignored due to lack of event files
