
#!/bin/sh
if [ ! "$SAS_ODFDIR" ]; then
echo ""
echo "Please set the SAS_ODFDIR environment variable to point at the directory"
echo "containing the ODF files for this observation."
echo ""
exit 1
fi
# # [INFO] [2024-11-30T23:50:09] Module name: VerifyODF
# # [INFO] [2024-11-30T23:50:09] Instrument: all
# # [INFO] [2024-11-30T23:50:09] Stream no.: 0001
# # [INFO] [2024-11-30T23:50:09] Module version number: 1.18
# # [INFO] [2024-11-30T23:50:09] Version of odfingest used was 3.33.1
# # [INFO] [2024-11-30T23:50:09] Module name: MakeCIF
# # [INFO] [2024-11-30T23:50:09] Instrument: all
# # [INFO] [2024-11-30T23:50:09] Stream no.: 0001
# # [INFO] [2024-11-30T23:50:09] Module version number: 1.23
# # [INFO] [2024-11-30T23:50:09] Observation start defined as >2012-12-16T13:56:07.000<
# # [INFO] [2024-11-30T23:50:09] Processing date defined as >2024-12-01T00:50:09<
# [COMMAND] [2024-11-30T23:50:09]
export SAS_MEMORY_MODEL=high
# [COMMAND] [2024-11-30T23:50:09]
export SAS_RAND_SEED=0693852101
# # [INFO] [2024-11-30T23:50:09] ## DEBUG ModuleResources: SAS_RAND_SEED set: 0693852101
# [COMMAND] [2024-11-30T23:50:09]
cifbuild analysisdate=2024-12-01T00:50:09 calindexset=product/P0693852101OBX000CALIND0000.FIT fullpath=no \
observationdate=2012-12-16T13:56:07.000 withccfpath=no -w 10
# # [OUTPUT] [2024-11-30T23:50:40]
# # [INFO] [2024-11-30T23:50:40] Task Run Time cifbuild 31.1277139186859s
#
# [COMMAND] [2024-11-30T23:50:40]
export SAS_MEMORY_MODEL=high
# [COMMAND] [2024-11-30T23:50:40]
export SAS_RAND_SEED=0693852101
# # [INFO] [2024-11-30T23:50:40] ## DEBUG ModuleResources: SAS_RAND_SEED set: 0693852101
# [COMMAND] [2024-11-30T23:50:40]
addattribute attributecomment="\"Telescope (mission) name\" \"Observation mode (pointing or slew)\" \"RA of instrument pointing \
(degrees)\" \"Date observations ended\" \"DEC of instrument pointing\" \"Observation identifier\" \"Date observations were made\" \
\"Name of observed object\" \"Name of PI\"" attributename="TELESCOP OBS_MODE RA_PNT DATE-END DEC_PNT OBS_ID DATE-OBS OBJECT \
OBSERVER" attributetype="string string real string real string string string string" realvalue="49.5825 -66.4860000" \
set=product/P0693852101OBX000CALIND0000.FIT stringvalue="\"XMM\" \"POINTED\" \"2012-12-16T15:41:34.000\" \"0693852101\" \
\"2012-12-16T13:56:07.000\" \"NGC 1313\" \"Prof Fiona Harrison\"" -w 10
# # [OUTPUT] [2024-11-30T23:50:40]
# # [INFO] [2024-11-30T23:50:40] Task Run Time addattribute 0.103900909423828s
#
# [COMMAND] [2024-11-30T23:50:40]
cp /scratch/226344.1.all.q/xmm/ppsprod/229489/product/P0693852101OBX000CALIND0000.FIT \
/scratch/226344.1.all.q/xmm/ppsprod/229489/intermediate/ccf.cif
# # [INFO] [2024-11-30T23:50:40] System RV 0
# # [INFO] [2024-11-30T23:50:40] Module name: GlobalHK
# # [INFO] [2024-11-30T23:50:40] Instrument: all
# # [INFO] [2024-11-30T23:50:40] Stream no.: 0001
# # [INFO] [2024-11-30T23:50:40] Module version number: 1.81
# [COMMAND] [2024-11-30T23:50:40]
export SAS_MEMORY_MODEL=high
# [COMMAND] [2024-11-30T23:50:40]
export SAS_RAND_SEED=0693852101
# # [INFO] [2024-11-30T23:50:40] ## DEBUG ModuleResources: SAS_RAND_SEED set: 0693852101
# [COMMAND] [2024-11-30T23:50:40]
preqgti preqgtifile=intermediate/GlobalHK-all-1-Attitude_GTI-X00000000000000.fits -w 10
# # [OUTPUT] [2024-11-30T23:50:45] ** preqgti::atthkgen: warning (NoAttitude), The attitude was requested for time 472064295.184\
#     which is more than 20 s outside the period for which the attitude is known (closest time is 20.0000000596 s away).
# ** preqgti::atthkgen: warning (NoAttitude), The attitude was requested for time 472064295.184 which is more than 20 s outside the\
#     period for which the attitude is known (closest time is 20.0000000596 s away).
# ** preqgti::atthkgen: warning (NoAttitude), The attitude was requested for time 472064296.184 which is more than 20 s outside the\
#     period for which the attitude is known (closest time is 20.0000000596 s away).
# ** preqgti::atthkgen: warning (NoAttitude), The attitude was requested for time 472064296.184 which is more than 20 s outside the\
#     period for which the attitude is known (closest time is 20.0000000596 s away).
# ** preqgti::atthkgen: warning (NoAttitude), The attitude was requested for time 472064297.184 which is more than 20 s outside the\
#     period for which the attitude is known (closest time is 20.0000000596 s away).
# ** preqgti::atthkgen: warning (NoAttitude), The attitude was requested for time 472064297.184 which is more than 20 s outside the\
#     period for which the attitude is known (closest time is 20.0000000596 s away).
# ** preqgti::atthkgen: warning (NoAttitude), The attitude was requested for time 472064298.184 which is more than 20 s outside the\
#     period for which the attitude is known (closest time is 20.0000000596 s away).
# ** preqgti::atthkgen: warning (NoAttitude), The attitude was requested for time 472064298.184 which is more than 20 s outside the\
#     period for which the attitude is known (closest time is 20.0000000596 s away).
# ** preqgti::atthkgen: warning (NoAttitude), The attitude was requested for time 472064299.184 which is more than 20 s outside the\
#     period for which the attitude is known (closest time is 21.0000000596 s away).
# ** preqgti::atthkgen: warning (NoAttitude), The attitude was requested for time 472064299.184 which is more than 20 s outside the\
#     period for which the attitude is known (closest time is 21.0000000596 s away).
# ** preqgti: warning (SummaryOfWarnings), 
# warning NoAttitude silently occurred 243860 times 
# # [INFO] [2024-11-30T23:50:45] Task Run Time preqgti 4.79912996292114s
#
# [COMMAND] [2024-11-30T23:50:45]
export SAS_MEMORY_MODEL=high
# [COMMAND] [2024-11-30T23:50:45]
export SAS_RAND_SEED=0693852101
# # [INFO] [2024-11-30T23:50:45] ## DEBUG ModuleResources: SAS_RAND_SEED set: 0693852101
# [COMMAND] [2024-11-30T23:50:45]
atthkgen atthkset=product/P0693852101OBX000ATTTSR0000.FIT preqgtifile=intermediate/GlobalHK-all-1-Attitude_GTI-X00000000000000.fits \
timestep=1 withpreqgti=no -w 10
# # [OUTPUT] [2024-11-30T23:50:45]
# # [INFO] [2024-11-30T23:50:45] Task Run Time atthkgen 0.243260145187378s
#
# [COMMAND] [2024-11-30T23:50:45]
export SAS_MEMORY_MODEL=high
# [COMMAND] [2024-11-30T23:50:45]
export SAS_RAND_SEED=0693852101
# # [INFO] [2024-11-30T23:50:45] ## DEBUG ModuleResources: SAS_RAND_SEED set: 0693852101
# [COMMAND] [2024-11-30T23:50:45]
orbit outfile=product/P0693852101OBX000ORBTSR0000.FIT timestep=1 useobsid=yes -w 10
# # [OUTPUT] [2024-11-30T23:50:45] orbit:- Output FITS Orbit timeseries: product/P0693852101OBX000ORBTSR0000.FIT
# orbit:- Binsize (timestep) of output): 1
# orbit:- Use OBSID data or whole orbit? T 
# # [INFO] [2024-11-30T23:50:45] Task Run Time orbit 0.306511878967285s
#
# [COMMAND] [2024-11-30T23:50:45]
export SAS_MEMORY_MODEL=high
# [COMMAND] [2024-11-30T23:50:45]
export SAS_RAND_SEED=0693852101
# # [INFO] [2024-11-30T23:50:45] ## DEBUG ModuleResources: SAS_RAND_SEED set: 0693852101
# [COMMAND] [2024-11-30T23:50:45]
radmonfix output=product/P0693852101OBX000RADMON0000.FIT radmonlist="odf/2385_0693852101_RMX00100ECX.FIT \
odf/2385_0693852101_RMX00200ECX.FIT" withoutputfile=yes -w 10
# # [OUTPUT] [2024-11-30T23:50:45] ** radmonfix: warning (Extrapolation), Evaluating OBT-MET fit polynomial at x=393285745.9 which\
#     is outside the time correlation data abscissa range [393287435.3, 393295508.9] - result of extrapolation might be afflicted\
#     with large numerical uncertainty.
# ** radmonfix: warning (Extrapolation), Evaluating OBT-MET fit polynomial at x=393285749.9 which is outside the time correlation\
#     data abscissa range [393287435.3, 393295508.9] - result of extrapolation might be afflicted with large numerical uncertainty.
# ** radmonfix: warning (Extrapolation), Evaluating OBT-MET fit polynomial at x=393285753.9 which is outside the time correlation\
#     data abscissa range [393287435.3, 393295508.9] - result of extrapolation might be afflicted with large numerical uncertainty.
# ** radmonfix: warning (Extrapolation), Evaluating OBT-MET fit polynomial at x=393285757.9 which is outside the time correlation\
#     data abscissa range [393287435.3, 393295508.9] - result of extrapolation might be afflicted with large numerical uncertainty.
# ** radmonfix: warning (Extrapolation), Evaluating OBT-MET fit polynomial at x=393285761.9 which is outside the time correlation\
#     data abscissa range [393287435.3, 393295508.9] - result of extrapolation might be afflicted with large numerical uncertainty.
# ** radmonfix: warning (Extrapolation), Evaluating OBT-MET fit polynomial at x=393285765.9 which is outside the time correlation\
#     data abscissa range [393287435.3, 393295508.9] - result of extrapolation might be afflicted with large numerical uncertainty.
# ** radmonfix: warning (Extrapolation), Evaluating OBT-MET fit polynomial at x=393285769.9 which is outside the time correlation\
#     data abscissa range [393287435.3, 393295508.9] - result of extrapolation might be afflicted with large numerical uncertainty.
# ** radmonfix: warning (Extrapolation), Evaluating OBT-MET fit polynomial at x=393285773.9 which is outside the time correlation\
#     data abscissa range [393287435.3, 393295508.9] - result of extrapolation might be afflicted with large numerical uncertainty.
# ** radmonfix: warning (Extrapolation), Evaluating OBT-MET fit polynomial at x=393285777.9 which is outside the time correlation\
#     data abscissa range [393287435.3, 393295508.9] - result of extrapolation might be afflicted with large numerical uncertainty.
# ** radmonfix: warning (Extrapolation), Evaluating OBT-MET fit polynomial at x=393285781.9 which is outside the time correlation\
#     data abscissa range [393287435.3, 393295508.9] - result of extrapolation might be afflicted with large numerical uncertainty.
# radmonfix:- Adding 2304 counts rows from row 466
# radmonfix:- Setting DATE-END...
# ** radmonfix: warning (SummaryOfWarnings), 
# warning Extrapolation silently occurred 692 times 
# # [INFO] [2024-11-30T23:50:45] Task Run Time radmonfix 0.129854917526245s
#
# [COMMAND] [2024-11-30T23:50:45]
cp /lhome/jperea/ppsdev/pcms3/src/pipeline/etc/EPICModes.fits \
/scratch/226344.1.all.q/xmm/ppsprod/229489/intermediate/GlobalHK-all-1-Observing_modes_Pileup_and_OoT_data-X00000000000000.fits
# # [INFO] [2024-11-30T23:50:45] System RV 0
# # [INFO] [2024-11-30T23:50:45] Copied EPIC Observing modes table, Pileup data and OoT data table in place
# [COMMAND] [2024-11-30T23:50:45]
cp /lhome/jperea/ppsdev/pcms3/src/pipeline/etc/ecfs.fits \
/scratch/226344.1.all.q/xmm/ppsprod/229489/intermediate/GlobalHK-all-1-Energy_Conversion_Factors-X00000000000000.fits
# # [INFO] [2024-11-30T23:50:46] System RV 0
# [COMMAND] [2024-11-30T23:50:46]
cp /lhome/jperea/ppsdev/pcms3/src/pipeline/etc/ecfgrid.fits.gz \
/scratch/226344.1.all.q/xmm/ppsprod/229489/intermediate/GlobalHK-all-1-Energy_Conversion_Factors_Grid-X00000000000000.fits
# # [INFO] [2024-11-30T23:50:46] System RV 0
# [COMMAND] [2024-11-30T23:50:46]
cp /lhome/jperea/ppsdev/pcms3/src/pipeline/etc/fluxgrid.fits.gz \
/scratch/226344.1.all.q/xmm/ppsprod/229489/intermediate/GlobalHK-all-1-Flux_Grid-X00000000000000.fits
# # [INFO] [2024-11-30T23:50:46] System RV 0
# # [INFO] [2024-11-30T23:50:46] Module name: ExpChooser
# # [INFO] [2024-11-30T23:50:46] Instrument: emos1
# # [INFO] [2024-11-30T23:50:46] Stream no.: 0001
# # [INFO] [2024-11-30T23:50:46] Module version number: 1.38
# # [INFO] [2024-11-30T23:50:46] Checking exposure S001 for processability
# # [INFO] [2024-11-30T23:50:46] Filter: CalClosed
# # [INFO] [2024-11-30T23:50:46] Instrument mode: PrimeFullWindow
# # [INFO] [2024-11-30T23:50:46] Exposure duration: 6125
# # [INFO] [2024-11-30T23:50:46] Exposure ignored due to invalid or unsupported filter
# # [INFO] [2024-11-30T23:50:46] Module name: ExpChooser
# # [INFO] [2024-11-30T23:50:46] Instrument: emos2
# # [INFO] [2024-11-30T23:50:46] Stream no.: 0001
# # [INFO] [2024-11-30T23:50:46] Module version number: 1.38
# # [INFO] [2024-11-30T23:50:46] Checking exposure S002 for processability
# # [INFO] [2024-11-30T23:50:46] Filter: CalClosed
# # [INFO] [2024-11-30T23:50:46] Instrument mode: PrimeFullWindow
# # [INFO] [2024-11-30T23:50:46] Exposure duration: 6131
# # [INFO] [2024-11-30T23:50:46] Exposure ignored due to invalid or unsupported filter
# # [INFO] [2024-11-30T23:50:46] Module name: ExpChooser
# # [INFO] [2024-11-30T23:50:46] Instrument: epn
# # [INFO] [2024-11-30T23:50:46] Stream no.: 0001
# # [INFO] [2024-11-30T23:50:46] Module version number: 1.38
# # [INFO] [2024-11-30T23:50:46] Checking exposure S003 for processability
# # [INFO] [2024-11-30T23:50:46] Filter: CalClosed
# # [INFO] [2024-11-30T23:50:46] Instrument mode: PrimeFullWindow
# # [INFO] [2024-11-30T23:50:46] Exposure duration: 4541
# # [INFO] [2024-11-30T23:50:46] Exposure ignored due to invalid or unsupported filter
# # [INFO] [2024-11-30T23:50:46] Module name: ExpChooser
# # [INFO] [2024-11-30T23:50:46] Instrument: epn
# # [INFO] [2024-11-30T23:50:46] Stream no.: 0002
# # [INFO] [2024-11-30T23:50:46] Module version number: 1.38
# # [INFO] [2024-11-30T23:50:46] Checking exposure U002 for processability
# # [INFO] [2024-11-30T23:50:46] Exposure ignored due to lack of event files
# # [INFO] [2024-11-30T23:50:46] Module name: ExpChooser
# # [INFO] [2024-11-30T23:50:46] Instrument: epn
# # [INFO] [2024-11-30T23:50:46] Stream no.: 0003
# # [INFO] [2024-11-30T23:50:46] Module version number: 1.38
# # [INFO] [2024-11-30T23:50:46] Checking exposure U003 for processability
# # [INFO] [2024-11-30T23:50:46] Exposure ignored due to lack of event files
# # [INFO] [2024-11-30T23:50:46] Module name: ExpChooser
# # [INFO] [2024-11-30T23:50:46] Instrument: epn
# # [INFO] [2024-11-30T23:50:46] Stream no.: 0004
# # [INFO] [2024-11-30T23:50:46] Module version number: 1.38
# # [INFO] [2024-11-30T23:50:46] Checking exposure U004 for processability
# # [INFO] [2024-11-30T23:50:46] Exposure ignored due to lack of event files
# # [INFO] [2024-11-30T23:50:46] Module name: ExpChooser
# # [INFO] [2024-11-30T23:50:46] Instrument: epn
# # [INFO] [2024-11-30T23:50:46] Stream no.: 0005
# # [INFO] [2024-11-30T23:50:46] Module version number: 1.38
# # [INFO] [2024-11-30T23:50:46] Checking exposure U005 for processability
# # [INFO] [2024-11-30T23:50:46] Exposure ignored due to lack of event files
# # [INFO] [2024-11-30T23:50:46] Module name: ExpChooser
# # [INFO] [2024-11-30T23:50:46] Instrument: epn
# # [INFO] [2024-11-30T23:50:46] Stream no.: 0006
# # [INFO] [2024-11-30T23:50:46] Module version number: 1.38
# # [INFO] [2024-11-30T23:50:46] Checking exposure U006 for processability
# # [INFO] [2024-11-30T23:50:46] Exposure ignored due to lack of event files
# # [INFO] [2024-11-30T23:50:46] Module name: ExpChooser
# # [INFO] [2024-11-30T23:50:46] Instrument: epn
# # [INFO] [2024-11-30T23:50:46] Stream no.: 0007
# # [INFO] [2024-11-30T23:50:46] Module version number: 1.38
# # [INFO] [2024-11-30T23:50:46] Checking exposure U007 for processability
# # [INFO] [2024-11-30T23:50:46] Exposure ignored due to lack of event files
# # [INFO] [2024-11-30T23:50:46] Module name: ExpChooser
# # [INFO] [2024-11-30T23:50:46] Instrument: epn
# # [INFO] [2024-11-30T23:50:46] Stream no.: 0008
# # [INFO] [2024-11-30T23:50:46] Module version number: 1.38
# # [INFO] [2024-11-30T23:50:46] Checking exposure U008 for processability
# # [INFO] [2024-11-30T23:50:46] Exposure ignored due to lack of event files
# # [INFO] [2024-11-30T23:50:46] Module name: ExpChooser
# # [INFO] [2024-11-30T23:50:46] Instrument: epn
# # [INFO] [2024-11-30T23:50:46] Stream no.: 0009
# # [INFO] [2024-11-30T23:50:46] Module version number: 1.38
# # [INFO] [2024-11-30T23:50:46] Checking exposure U009 for processability
# # [INFO] [2024-11-30T23:50:46] Exposure ignored due to lack of event files
# # [INFO] [2024-11-30T23:50:46] Module name: ExpChooser
# # [INFO] [2024-11-30T23:50:46] Instrument: epn
# # [INFO] [2024-11-30T23:50:46] Stream no.: 0010
# # [INFO] [2024-11-30T23:50:46] Module version number: 1.38
# # [INFO] [2024-11-30T23:50:46] Checking exposure U010 for processability
# # [INFO] [2024-11-30T23:50:46] Exposure ignored due to lack of event files
# # [INFO] [2024-11-30T23:50:46] Module name: ExpChooser
# # [INFO] [2024-11-30T23:50:46] Instrument: epn
# # [INFO] [2024-11-30T23:50:46] Stream no.: 0011
# # [INFO] [2024-11-30T23:50:46] Module version number: 1.38
# # [INFO] [2024-11-30T23:50:46] Checking exposure U011 for processability
# # [INFO] [2024-11-30T23:50:46] Exposure ignored due to lack of event files
# # [INFO] [2024-11-30T23:50:46] Module name: ExpChooser
# # [INFO] [2024-11-30T23:50:46] Instrument: epn
# # [INFO] [2024-11-30T23:50:46] Stream no.: 0012
# # [INFO] [2024-11-30T23:50:46] Module version number: 1.38
# # [INFO] [2024-11-30T23:50:46] Checking exposure U012 for processability
# # [INFO] [2024-11-30T23:50:46] Exposure ignored due to lack of event files
# # [INFO] [2024-11-30T23:50:46] Module name: ExpChooser
# # [INFO] [2024-11-30T23:50:46] Instrument: epn
# # [INFO] [2024-11-30T23:50:46] Stream no.: 0013
# # [INFO] [2024-11-30T23:50:46] Module version number: 1.38
# # [INFO] [2024-11-30T23:50:46] Checking exposure U013 for processability
# # [INFO] [2024-11-30T23:50:46] Exposure ignored due to lack of event files
# # [INFO] [2024-11-30T23:50:46] Module name: ExpChooser
# # [INFO] [2024-11-30T23:50:46] Instrument: epn
# # [INFO] [2024-11-30T23:50:46] Stream no.: 0014
# # [INFO] [2024-11-30T23:50:46] Module version number: 1.38
# # [INFO] [2024-11-30T23:50:46] Checking exposure U101 for processability
# # [INFO] [2024-11-30T23:50:46] Exposure ignored due to lack of event files
