
#!/bin/sh
if [ ! "$SAS_ODFDIR" ]; then
echo ""
echo "Please set the SAS_ODFDIR environment variable to point at the directory"
echo "containing the ODF files for this observation."
echo ""
exit 1
fi
# # [INFO] [2024-11-30T23:50:19] Module name: VerifyODF
# # [INFO] [2024-11-30T23:50:19] Instrument: all
# # [INFO] [2024-11-30T23:50:19] Stream no.: 0001
# # [INFO] [2024-11-30T23:50:19] Module version number: 1.18
# # [INFO] [2024-11-30T23:50:19] Version of odfingest used was 3.33.1
# # [INFO] [2024-11-30T23:50:19] Module name: MakeCIF
# # [INFO] [2024-11-30T23:50:19] Instrument: all
# # [INFO] [2024-11-30T23:50:19] Stream no.: 0001
# # [INFO] [2024-11-30T23:50:19] Module version number: 1.23
# # [INFO] [2024-11-30T23:50:19] Observation start defined as >2020-09-07T12:27:43.000<
# # [INFO] [2024-11-30T23:50:19] Processing date defined as >2024-12-01T00:50:19<
# [COMMAND] [2024-11-30T23:50:19]
export SAS_MEMORY_MODEL=high
# [COMMAND] [2024-11-30T23:50:19]
export SAS_RAND_SEED=0823594101
# # [INFO] [2024-11-30T23:50:19] ## DEBUG ModuleResources: SAS_RAND_SEED set: 0823594101
# [COMMAND] [2024-11-30T23:50:19]
cifbuild analysisdate=2024-12-01T00:50:19 calindexset=product/P0823594101OBX000CALIND0000.FIT fullpath=no \
observationdate=2020-09-07T12:27:43.000 withccfpath=no -w 10
# # [OUTPUT] [2024-11-30T23:50:52]
# # [INFO] [2024-11-30T23:50:52] Task Run Time cifbuild 32.8742578029633s
#
# [COMMAND] [2024-11-30T23:50:52]
export SAS_MEMORY_MODEL=high
# [COMMAND] [2024-11-30T23:50:52]
export SAS_RAND_SEED=0823594101
# # [INFO] [2024-11-30T23:50:52] ## DEBUG ModuleResources: SAS_RAND_SEED set: 0823594101
# [COMMAND] [2024-11-30T23:50:52]
addattribute attributecomment="\"Telescope (mission) name\" \"Observation mode (pointing or slew)\" \"Observation identifier\" \
\"Name of PI\" \"RA of instrument pointing (degrees)\" \"DEC of instrument pointing\" \"Date observations were made\" \"Date \
observations ended\" \"Name of observed object\"" attributename="TELESCOP OBS_MODE OBS_ID OBSERVER RA_PNT DEC_PNT DATE-OBS DATE-END \
OBJECT" attributetype="string string string string real real string string string" realvalue="274.5009165 -16.1311945" \
set=product/P0823594101OBX000CALIND0000.FIT stringvalue="\"XMM\" \"POINTED\" \"0823594101\" \"Dr Nanda Rea\" \
\"2020-09-07T12:27:43.000\" \"2020-09-07T14:27:37.000\" \"Swift J1818.0-1607\"" -w 10
# # [OUTPUT] [2024-11-30T23:50:52]
# # [INFO] [2024-11-30T23:50:52] Task Run Time addattribute 0.0759999752044678s
#
# [COMMAND] [2024-11-30T23:50:52]
cp /scratch/226366.1.all.q/xmm/ppsprod/229513/product/P0823594101OBX000CALIND0000.FIT \
/scratch/226366.1.all.q/xmm/ppsprod/229513/intermediate/ccf.cif
# # [INFO] [2024-11-30T23:50:52] System RV 0
# # [INFO] [2024-11-30T23:50:52] Module name: GlobalHK
# # [INFO] [2024-11-30T23:50:52] Instrument: all
# # [INFO] [2024-11-30T23:50:52] Stream no.: 0001
# # [INFO] [2024-11-30T23:50:52] Module version number: 1.81
# [COMMAND] [2024-11-30T23:50:52]
export SAS_MEMORY_MODEL=high
# [COMMAND] [2024-11-30T23:50:52]
export SAS_RAND_SEED=0823594101
# # [INFO] [2024-11-30T23:50:52] ## DEBUG ModuleResources: SAS_RAND_SEED set: 0823594101
# [COMMAND] [2024-11-30T23:50:52]
preqgti preqgtifile=intermediate/GlobalHK-all-1-Attitude_GTI-X00000000000000.fits -w 10
# # [OUTPUT] [2024-11-30T23:50:54] ** preqgti::atthkgen: warning (NoAttitude), The attitude was requested for time 715882763.184\
#     which is more than 20 s outside the period for which the attitude is known (closest time is 20.9999998808 s away).
# ** preqgti::atthkgen: warning (NoAttitude), The attitude was requested for time 715882763.184 which is more than 20 s outside the\
#     period for which the attitude is known (closest time is 20.9999998808 s away).
# ** preqgti::atthkgen: warning (NoAttitude), The attitude was requested for time 715882764.184 which is more than 20 s outside the\
#     period for which the attitude is known (closest time is 20.9999998808 s away).
# ** preqgti::atthkgen: warning (NoAttitude), The attitude was requested for time 715882764.184 which is more than 20 s outside the\
#     period for which the attitude is known (closest time is 20.9999998808 s away).
# ** preqgti::atthkgen: warning (NoAttitude), The attitude was requested for time 715882765.184 which is more than 20 s outside the\
#     period for which the attitude is known (closest time is 20.9999998808 s away).
# ** preqgti::atthkgen: warning (NoAttitude), The attitude was requested for time 715882765.184 which is more than 20 s outside the\
#     period for which the attitude is known (closest time is 20.9999998808 s away).
# ** preqgti::atthkgen: warning (NoAttitude), The attitude was requested for time 715882766.184 which is more than 20 s outside the\
#     period for which the attitude is known (closest time is 20.9999998808 s away).
# ** preqgti::atthkgen: warning (NoAttitude), The attitude was requested for time 715882766.184 which is more than 20 s outside the\
#     period for which the attitude is known (closest time is 20.9999998808 s away).
# ** preqgti::atthkgen: warning (NoAttitude), The attitude was requested for time 715882767.184 which is more than 20 s outside the\
#     period for which the attitude is known (closest time is 21.9999998808 s away).
# ** preqgti::atthkgen: warning (NoAttitude), The attitude was requested for time 715882767.184 which is more than 20 s outside the\
#     period for which the attitude is known (closest time is 21.9999998808 s away).
# ** preqgti: warning (SummaryOfWarnings), 
# warning NoAttitude silently occurred 47044 times 
# # [INFO] [2024-11-30T23:50:54] Task Run Time preqgti 1.3762731552124s
#
# [COMMAND] [2024-11-30T23:50:54]
export SAS_MEMORY_MODEL=high
# [COMMAND] [2024-11-30T23:50:54]
export SAS_RAND_SEED=0823594101
# # [INFO] [2024-11-30T23:50:54] ## DEBUG ModuleResources: SAS_RAND_SEED set: 0823594101
# [COMMAND] [2024-11-30T23:50:54]
atthkgen atthkset=product/P0823594101OBX000ATTTSR0000.FIT preqgtifile=intermediate/GlobalHK-all-1-Attitude_GTI-X00000000000000.fits \
timestep=1 withpreqgti=no -w 10
# # [OUTPUT] [2024-11-30T23:50:54]
# # [INFO] [2024-11-30T23:50:54] Task Run Time atthkgen 0.265306949615479s
#
# [COMMAND] [2024-11-30T23:50:54]
export SAS_MEMORY_MODEL=high
# [COMMAND] [2024-11-30T23:50:54]
export SAS_RAND_SEED=0823594101
# # [INFO] [2024-11-30T23:50:54] ## DEBUG ModuleResources: SAS_RAND_SEED set: 0823594101
# [COMMAND] [2024-11-30T23:50:54]
orbit outfile=product/P0823594101OBX000ORBTSR0000.FIT timestep=1 useobsid=yes -w 10
# # [OUTPUT] [2024-11-30T23:50:54] orbit:- Output FITS Orbit timeseries: product/P0823594101OBX000ORBTSR0000.FIT
# orbit:- Binsize (timestep) of output): 1
# orbit:- Use OBSID data or whole orbit? T 
# # [INFO] [2024-11-30T23:50:54] Task Run Time orbit 0.366087913513184s
#
# [COMMAND] [2024-11-30T23:50:54]
export SAS_MEMORY_MODEL=high
# [COMMAND] [2024-11-30T23:50:54]
export SAS_RAND_SEED=0823594101
# # [INFO] [2024-11-30T23:50:54] ## DEBUG ModuleResources: SAS_RAND_SEED set: 0823594101
# [COMMAND] [2024-11-30T23:50:54]
radmonfix output=product/P0823594101OBX000RADMON0000.FIT radmonlist=odf/3800_0823594101_RMX00100ECX.FIT withoutputfile=yes -w 10
# # [OUTPUT] [2024-11-30T23:50:54] ** radmonfix: warning (Extrapolation), Evaluating OBT-MET fit polynomial at x=187154553.9 which\
#     is outside the time correlation data abscissa range [187156230.3, 187165174.5] - result of extrapolation might be afflicted\
#     with large numerical uncertainty.
# ** radmonfix: warning (Extrapolation), Evaluating OBT-MET fit polynomial at x=187154557.9 which is outside the time correlation\
#     data abscissa range [187156230.3, 187165174.5] - result of extrapolation might be afflicted with large numerical uncertainty.
# ** radmonfix: warning (Extrapolation), Evaluating OBT-MET fit polynomial at x=187154561.9 which is outside the time correlation\
#     data abscissa range [187156230.3, 187165174.5] - result of extrapolation might be afflicted with large numerical uncertainty.
# ** radmonfix: warning (Extrapolation), Evaluating OBT-MET fit polynomial at x=187154565.9 which is outside the time correlation\
#     data abscissa range [187156230.3, 187165174.5] - result of extrapolation might be afflicted with large numerical uncertainty.
# ** radmonfix: warning (Extrapolation), Evaluating OBT-MET fit polynomial at x=187154569.9 which is outside the time correlation\
#     data abscissa range [187156230.3, 187165174.5] - result of extrapolation might be afflicted with large numerical uncertainty.
# ** radmonfix: warning (Extrapolation), Evaluating OBT-MET fit polynomial at x=187154573.9 which is outside the time correlation\
#     data abscissa range [187156230.3, 187165174.5] - result of extrapolation might be afflicted with large numerical uncertainty.
# ** radmonfix: warning (Extrapolation), Evaluating OBT-MET fit polynomial at x=187154577.9 which is outside the time correlation\
#     data abscissa range [187156230.3, 187165174.5] - result of extrapolation might be afflicted with large numerical uncertainty.
# ** radmonfix: warning (Extrapolation), Evaluating OBT-MET fit polynomial at x=187154581.9 which is outside the time correlation\
#     data abscissa range [187156230.3, 187165174.5] - result of extrapolation might be afflicted with large numerical uncertainty.
# ** radmonfix: warning (Extrapolation), Evaluating OBT-MET fit polynomial at x=187154585.9 which is outside the time correlation\
#     data abscissa range [187156230.3, 187165174.5] - result of extrapolation might be afflicted with large numerical uncertainty.
# ** radmonfix: warning (Extrapolation), Evaluating OBT-MET fit polynomial at x=187154589.9 which is outside the time correlation\
#     data abscissa range [187156230.3, 187165174.5] - result of extrapolation might be afflicted with large numerical uncertainty.
# radmonfix:- Setting DATE-END...
# ** radmonfix: warning (SummaryOfWarnings), 
# warning Extrapolation silently occurred 392 times 
# # [INFO] [2024-11-30T23:50:54] Task Run Time radmonfix 0.142216920852661s
#
# [COMMAND] [2024-11-30T23:50:54]
cp /lhome/jperea/ppsdev/pcms3/src/pipeline/etc/EPICModes.fits \
/scratch/226366.1.all.q/xmm/ppsprod/229513/intermediate/GlobalHK-all-1-Observing_modes_Pileup_and_OoT_data-X00000000000000.fits
# # [INFO] [2024-11-30T23:50:54] System RV 0
# # [INFO] [2024-11-30T23:50:54] Copied EPIC Observing modes table, Pileup data and OoT data table in place
# [COMMAND] [2024-11-30T23:50:54]
cp /lhome/jperea/ppsdev/pcms3/src/pipeline/etc/ecfs.fits \
/scratch/226366.1.all.q/xmm/ppsprod/229513/intermediate/GlobalHK-all-1-Energy_Conversion_Factors-X00000000000000.fits
# # [INFO] [2024-11-30T23:50:54] System RV 0
# [COMMAND] [2024-11-30T23:50:54]
cp /lhome/jperea/ppsdev/pcms3/src/pipeline/etc/ecfgrid.fits.gz \
/scratch/226366.1.all.q/xmm/ppsprod/229513/intermediate/GlobalHK-all-1-Energy_Conversion_Factors_Grid-X00000000000000.fits
# # [INFO] [2024-11-30T23:50:54] System RV 0
# [COMMAND] [2024-11-30T23:50:54]
cp /lhome/jperea/ppsdev/pcms3/src/pipeline/etc/fluxgrid.fits.gz \
/scratch/226366.1.all.q/xmm/ppsprod/229513/intermediate/GlobalHK-all-1-Flux_Grid-X00000000000000.fits
# # [INFO] [2024-11-30T23:50:54] System RV 0
# # [INFO] [2024-11-30T23:50:54] Module name: ExpChooser
# # [INFO] [2024-11-30T23:50:54] Instrument: emos1
# # [INFO] [2024-11-30T23:50:54] Stream no.: 0001
# # [INFO] [2024-11-30T23:50:54] Module version number: 1.38
# # [INFO] [2024-11-30T23:50:54] Checking exposure S001 for processability
# # [INFO] [2024-11-30T23:50:54] Filter: CalClosed
# # [INFO] [2024-11-30T23:50:54] Instrument mode: PrimeFullWindow
# # [INFO] [2024-11-30T23:50:54] Exposure duration: 6991
# # [INFO] [2024-11-30T23:50:54] Exposure ignored due to invalid or unsupported filter
# # [INFO] [2024-11-30T23:50:54] Module name: ExpChooser
# # [INFO] [2024-11-30T23:50:54] Instrument: emos2
# # [INFO] [2024-11-30T23:50:54] Stream no.: 0001
# # [INFO] [2024-11-30T23:50:54] Module version number: 1.38
# # [INFO] [2024-11-30T23:50:54] Checking exposure S002 for processability
# # [INFO] [2024-11-30T23:50:54] Filter: CalClosed
# # [INFO] [2024-11-30T23:50:54] Instrument mode: PrimeFullWindow
# # [INFO] [2024-11-30T23:50:54] Exposure duration: 6970
# # [INFO] [2024-11-30T23:50:54] Exposure ignored due to invalid or unsupported filter
# # [INFO] [2024-11-30T23:50:54] Module name: ExpChooser
# # [INFO] [2024-11-30T23:50:54] Instrument: epn
# # [INFO] [2024-11-30T23:50:54] Stream no.: 0001
# # [INFO] [2024-11-30T23:50:54] Module version number: 1.38
# # [INFO] [2024-11-30T23:50:54] Checking exposure S003 for processability
# # [INFO] [2024-11-30T23:50:54] Filter: CalClosed
# # [INFO] [2024-11-30T23:50:54] Instrument mode: PrimeFullWindow
# # [INFO] [2024-11-30T23:50:54] Exposure duration: 5126
# # [INFO] [2024-11-30T23:50:54] Exposure ignored due to invalid or unsupported filter
# # [INFO] [2024-11-30T23:50:54] Module name: ExpChooser
# # [INFO] [2024-11-30T23:50:54] Instrument: epn
# # [INFO] [2024-11-30T23:50:54] Stream no.: 0002
# # [INFO] [2024-11-30T23:50:54] Module version number: 1.38
# # [INFO] [2024-11-30T23:50:54] Checking exposure U002 for processability
# # [INFO] [2024-11-30T23:50:54] Exposure ignored due to lack of event files
# # [INFO] [2024-11-30T23:50:54] Module name: ExpChooser
# # [INFO] [2024-11-30T23:50:54] Instrument: epn
# # [INFO] [2024-11-30T23:50:54] Stream no.: 0003
# # [INFO] [2024-11-30T23:50:55] Module version number: 1.38
# # [INFO] [2024-11-30T23:50:55] Checking exposure U003 for processability
# # [INFO] [2024-11-30T23:50:55] Exposure ignored due to lack of event files
# # [INFO] [2024-11-30T23:50:55] Module name: ExpChooser
# # [INFO] [2024-11-30T23:50:55] Instrument: epn
# # [INFO] [2024-11-30T23:50:55] Stream no.: 0004
# # [INFO] [2024-11-30T23:50:55] Module version number: 1.38
# # [INFO] [2024-11-30T23:50:55] Checking exposure U004 for processability
# # [INFO] [2024-11-30T23:50:55] Exposure ignored due to lack of event files
# # [INFO] [2024-11-30T23:50:55] Module name: ExpChooser
# # [INFO] [2024-11-30T23:50:55] Instrument: epn
# # [INFO] [2024-11-30T23:50:55] Stream no.: 0005
# # [INFO] [2024-11-30T23:50:55] Module version number: 1.38
# # [INFO] [2024-11-30T23:50:55] Checking exposure U005 for processability
# # [INFO] [2024-11-30T23:50:55] Exposure ignored due to lack of event files
# # [INFO] [2024-11-30T23:50:55] Module name: ExpChooser
# # [INFO] [2024-11-30T23:50:55] Instrument: epn
# # [INFO] [2024-11-30T23:50:55] Stream no.: 0006
# # [INFO] [2024-11-30T23:50:55] Module version number: 1.38
# # [INFO] [2024-11-30T23:50:55] Checking exposure U006 for processability
# # [INFO] [2024-11-30T23:50:55] Exposure ignored due to lack of event files
# # [INFO] [2024-11-30T23:50:55] Module name: ExpChooser
# # [INFO] [2024-11-30T23:50:55] Instrument: epn
# # [INFO] [2024-11-30T23:50:55] Stream no.: 0007
# # [INFO] [2024-11-30T23:50:55] Module version number: 1.38
# # [INFO] [2024-11-30T23:50:55] Checking exposure U007 for processability
# # [INFO] [2024-11-30T23:50:55] Exposure ignored due to lack of event files
# # [INFO] [2024-11-30T23:50:55] Module name: ExpChooser
# # [INFO] [2024-11-30T23:50:55] Instrument: epn
# # [INFO] [2024-11-30T23:50:55] Stream no.: 0008
# # [INFO] [2024-11-30T23:50:55] Module version number: 1.38
# # [INFO] [2024-11-30T23:50:55] Checking exposure U008 for processability
# # [INFO] [2024-11-30T23:50:55] Exposure ignored due to lack of event files
# # [INFO] [2024-11-30T23:50:55] Module name: ExpChooser
# # [INFO] [2024-11-30T23:50:55] Instrument: epn
# # [INFO] [2024-11-30T23:50:55] Stream no.: 0009
# # [INFO] [2024-11-30T23:50:55] Module version number: 1.38
# # [INFO] [2024-11-30T23:50:55] Checking exposure U009 for processability
# # [INFO] [2024-11-30T23:50:55] Exposure ignored due to lack of event files
# # [INFO] [2024-11-30T23:50:55] Module name: ExpChooser
# # [INFO] [2024-11-30T23:50:55] Instrument: epn
# # [INFO] [2024-11-30T23:50:55] Stream no.: 0010
# # [INFO] [2024-11-30T23:50:55] Module version number: 1.38
# # [INFO] [2024-11-30T23:50:55] Checking exposure U010 for processability
# # [INFO] [2024-11-30T23:50:55] Exposure ignored due to lack of event files
# # [INFO] [2024-11-30T23:50:55] Module name: ExpChooser
# # [INFO] [2024-11-30T23:50:55] Instrument: epn
# # [INFO] [2024-11-30T23:50:55] Stream no.: 0011
# # [INFO] [2024-11-30T23:50:55] Module version number: 1.38
# # [INFO] [2024-11-30T23:50:55] Checking exposure U011 for processability
# # [INFO] [2024-11-30T23:50:55] Exposure ignored due to lack of event files
# # [INFO] [2024-11-30T23:50:55] Module name: ExpChooser
# # [INFO] [2024-11-30T23:50:55] Instrument: epn
# # [INFO] [2024-11-30T23:50:55] Stream no.: 0012
# # [INFO] [2024-11-30T23:50:55] Module version number: 1.38
# # [INFO] [2024-11-30T23:50:55] Checking exposure U012 for processability
# # [INFO] [2024-11-30T23:50:55] Exposure ignored due to lack of event files
# # [INFO] [2024-11-30T23:50:55] Module name: ExpChooser
# # [INFO] [2024-11-30T23:50:55] Instrument: epn
# # [INFO] [2024-11-30T23:50:55] Stream no.: 0013
# # [INFO] [2024-11-30T23:50:55] Module version number: 1.38
# # [INFO] [2024-11-30T23:50:55] Checking exposure U013 for processability
# # [INFO] [2024-11-30T23:50:55] Exposure ignored due to lack of event files
# # [INFO] [2024-11-30T23:50:55] Module name: ExpChooser
# # [INFO] [2024-11-30T23:50:55] Instrument: epn
# # [INFO] [2024-11-30T23:50:55] Stream no.: 0014
# # [INFO] [2024-11-30T23:50:55] Module version number: 1.38
# # [INFO] [2024-11-30T23:50:55] Checking exposure U700 for processability
# # [INFO] [2024-11-30T23:50:55] Exposure ignored due to lack of event files
