
#!/bin/sh
if [ ! "$SAS_ODFDIR" ]; then
echo ""
echo "Please set the SAS_ODFDIR environment variable to point at the directory"
echo "containing the ODF files for this observation."
echo ""
exit 1
fi
# # [INFO] [2024-11-30T23:52:33] Module name: VerifyODF
# # [INFO] [2024-11-30T23:52:33] Instrument: all
# # [INFO] [2024-11-30T23:52:33] Stream no.: 0001
# # [INFO] [2024-11-30T23:52:33] Module version number: 1.18
# # [INFO] [2024-11-30T23:52:33] Version of odfingest used was 3.33.1
# # [INFO] [2024-11-30T23:52:33] Module name: MakeCIF
# # [INFO] [2024-11-30T23:52:33] Instrument: all
# # [INFO] [2024-11-30T23:52:33] Stream no.: 0001
# # [INFO] [2024-11-30T23:52:33] Module version number: 1.23
# # [INFO] [2024-11-30T23:52:33] Observation start defined as >2019-11-15T08:21:38.000<
# # [INFO] [2024-11-30T23:52:33] Processing date defined as >2024-12-01T00:52:33<
# [COMMAND] [2024-11-30T23:52:33]
export SAS_MEMORY_MODEL=high
# [COMMAND] [2024-11-30T23:52:33]
export SAS_RAND_SEED=0844341501
# # [INFO] [2024-11-30T23:52:33] ## DEBUG ModuleResources: SAS_RAND_SEED set: 0844341501
# [COMMAND] [2024-11-30T23:52:33]
cifbuild analysisdate=2024-12-01T00:52:33 calindexset=product/P0844341501OBX000CALIND0000.FIT fullpath=no \
observationdate=2019-11-15T08:21:38.000 withccfpath=no -w 10
# # [OUTPUT] [2024-11-30T23:53:03]
# # [INFO] [2024-11-30T23:53:03] Task Run Time cifbuild 29.9415709972382s
#
# [COMMAND] [2024-11-30T23:53:03]
export SAS_MEMORY_MODEL=high
# [COMMAND] [2024-11-30T23:53:03]
export SAS_RAND_SEED=0844341501
# # [INFO] [2024-11-30T23:53:03] ## DEBUG ModuleResources: SAS_RAND_SEED set: 0844341501
# [COMMAND] [2024-11-30T23:53:03]
addattribute attributecomment="\"Telescope (mission) name\" \"Name of observed object\" \"Date observations were made\" \
\"Observation identifier\" \"Date observations ended\" \"DEC of instrument pointing\" \"Observation mode (pointing or slew)\" \"RA \
of instrument pointing (degrees)\" \"Name of PI\"" attributename="TELESCOP OBJECT DATE-OBS OBS_ID DATE-END DEC_PNT OBS_MODE RA_PNT \
OBSERVER" attributetype="string string string string string real string real string" realvalue="\"19.8650833\" \"155.877375\"" \
set=product/P0844341501OBX000CALIND0000.FIT stringvalue="\"XMM\" \"NGC 3227\" \"2019-11-15T08:21:38.000\" \"0844341501\" \
\"2019-11-15T09:10:29.000\" \"POINTED\" \"Prof Jelle Kaastra\"" -w 10
# # [OUTPUT] [2024-11-30T23:53:03]
# # [INFO] [2024-11-30T23:53:03] Task Run Time addattribute 0.0597720146179199s
#
# [COMMAND] [2024-11-30T23:53:03]
cp /scratch/226556.1.all.q/xmm/ppsprod/229701/product/P0844341501OBX000CALIND0000.FIT \
/scratch/226556.1.all.q/xmm/ppsprod/229701/intermediate/ccf.cif
# # [INFO] [2024-11-30T23:53:03] System RV 0
# # [INFO] [2024-11-30T23:53:03] Module name: GlobalHK
# # [INFO] [2024-11-30T23:53:03] Instrument: all
# # [INFO] [2024-11-30T23:53:03] Stream no.: 0001
# # [INFO] [2024-11-30T23:53:03] Module version number: 1.81
# [COMMAND] [2024-11-30T23:53:03]
export SAS_MEMORY_MODEL=high
# [COMMAND] [2024-11-30T23:53:03]
export SAS_RAND_SEED=0844341501
# # [INFO] [2024-11-30T23:53:03] ## DEBUG ModuleResources: SAS_RAND_SEED set: 0844341501
# [COMMAND] [2024-11-30T23:53:03]
preqgti preqgtifile=intermediate/GlobalHK-all-1-Attitude_GTI-X00000000000000.fits -w 10
# # [OUTPUT] [2024-11-30T23:53:06] ** preqgti: warning (TemporalOverlapInAHF), Temporal overlap of 0.490002s between AHF entries 172\
#     (2019-11-15T08:14:54.000) and 173 (2019-11-15T08:15:34.000) - adjusting duration of entry 172 accordingly
# ** preqgti::atthkgen: warning (NoAttitude), The attitude was requested for time 690192962.184 which is more than 20 s outside the\
#     period for which the attitude is known (closest time is -41 s away).
# ** preqgti::atthkgen: warning (NoAttitude), The attitude was requested for time 690192962.184 which is more than 20 s outside the\
#     period for which the attitude is known (closest time is -41 s away).
# ** preqgti::atthkgen: warning (NoAttitude), The attitude was requested for time 690192963.184 which is more than 20 s outside the\
#     period for which the attitude is known (closest time is -40 s away).
# ** preqgti::atthkgen: warning (NoAttitude), The attitude was requested for time 690192963.184 which is more than 20 s outside the\
#     period for which the attitude is known (closest time is -40 s away).
# ** preqgti::atthkgen: warning (NoAttitude), The attitude was requested for time 690192964.184 which is more than 20 s outside the\
#     period for which the attitude is known (closest time is -39 s away).
# ** preqgti::atthkgen: warning (NoAttitude), The attitude was requested for time 690192964.184 which is more than 20 s outside the\
#     period for which the attitude is known (closest time is -39 s away).
# ** preqgti::atthkgen: warning (NoAttitude), The attitude was requested for time 690192965.184 which is more than 20 s outside the\
#     period for which the attitude is known (closest time is -38 s away).
# ** preqgti::atthkgen: warning (NoAttitude), The attitude was requested for time 690192965.184 which is more than 20 s outside the\
#     period for which the attitude is known (closest time is -38 s away).
# ** preqgti::atthkgen: warning (NoAttitude), The attitude was requested for time 690192966.184 which is more than 20 s outside the\
#     period for which the attitude is known (closest time is -37 s away).
# ** preqgti::atthkgen: warning (NoAttitude), The attitude was requested for time 690192966.184 which is more than 20 s outside the\
#     period for which the attitude is known (closest time is -37 s away).
# ** preqgti: warning (SummaryOfWarnings), 
# warning NoAttitude silently occurred 132722 times 
# # [INFO] [2024-11-30T23:53:06] Task Run Time preqgti 3.47081279754639s
#
# [COMMAND] [2024-11-30T23:53:06]
export SAS_MEMORY_MODEL=high
# [COMMAND] [2024-11-30T23:53:06]
export SAS_RAND_SEED=0844341501
# # [INFO] [2024-11-30T23:53:06] ## DEBUG ModuleResources: SAS_RAND_SEED set: 0844341501
# [COMMAND] [2024-11-30T23:53:06]
atthkgen atthkset=product/P0844341501OBX000ATTTSR0000.FIT preqgtifile=intermediate/GlobalHK-all-1-Attitude_GTI-X00000000000000.fits \
timestep=1 withpreqgti=no -w 10
# # [OUTPUT] [2024-11-30T23:53:07]
# # [INFO] [2024-11-30T23:53:07] Task Run Time atthkgen 0.212991952896118s
#
# [COMMAND] [2024-11-30T23:53:07]
export SAS_MEMORY_MODEL=high
# [COMMAND] [2024-11-30T23:53:07]
export SAS_RAND_SEED=0844341501
# # [INFO] [2024-11-30T23:53:07] ## DEBUG ModuleResources: SAS_RAND_SEED set: 0844341501
# [COMMAND] [2024-11-30T23:53:07]
orbit outfile=product/P0844341501OBX000ORBTSR0000.FIT timestep=1 useobsid=yes -w 10
# # [OUTPUT] [2024-11-30T23:53:07] orbit:- Output FITS Orbit timeseries: product/P0844341501OBX000ORBTSR0000.FIT
# orbit:- Binsize (timestep) of output): 1
# orbit:- Use OBSID data or whole orbit? T 
# # [INFO] [2024-11-30T23:53:07] Task Run Time orbit 0.198452949523926s
#
# [COMMAND] [2024-11-30T23:53:07]
export SAS_MEMORY_MODEL=high
# [COMMAND] [2024-11-30T23:53:07]
export SAS_RAND_SEED=0844341501
# # [INFO] [2024-11-30T23:53:07] ## DEBUG ModuleResources: SAS_RAND_SEED set: 0844341501
# [COMMAND] [2024-11-30T23:53:07]
radmonfix output=product/P0844341501OBX000RADMON0000.FIT radmonlist=odf/3651_0844341501_RMX00100ECX.FIT withoutputfile=yes -w 10
# # [OUTPUT] [2024-11-30T23:53:07] ** radmonfix: warning (Extrapolation), Evaluating OBT-MET fit polynomial at x=161485953.9 which\
#     is outside the time correlation data abscissa range [161480979.2, 161485850.8] - result of extrapolation might be afflicted\
#     with large numerical uncertainty.
# ** radmonfix: warning (Extrapolation), Evaluating OBT-MET fit polynomial at x=161485957.9 which is outside the time correlation\
#     data abscissa range [161480979.2, 161485850.8] - result of extrapolation might be afflicted with large numerical uncertainty.
# ** radmonfix: warning (Extrapolation), Evaluating OBT-MET fit polynomial at x=161485961.9 which is outside the time correlation\
#     data abscissa range [161480979.2, 161485850.8] - result of extrapolation might be afflicted with large numerical uncertainty.
# ** radmonfix: warning (Extrapolation), Evaluating OBT-MET fit polynomial at x=161485965.9 which is outside the time correlation\
#     data abscissa range [161480979.2, 161485850.8] - result of extrapolation might be afflicted with large numerical uncertainty.
# ** radmonfix: warning (Extrapolation), Evaluating OBT-MET fit polynomial at x=161485969.9 which is outside the time correlation\
#     data abscissa range [161480979.2, 161485850.8] - result of extrapolation might be afflicted with large numerical uncertainty.
# ** radmonfix: warning (Extrapolation), Evaluating OBT-MET fit polynomial at x=161485973.9 which is outside the time correlation\
#     data abscissa range [161480979.2, 161485850.8] - result of extrapolation might be afflicted with large numerical uncertainty.
# ** radmonfix: warning (Extrapolation), Evaluating OBT-MET fit polynomial at x=161485977.9 which is outside the time correlation\
#     data abscissa range [161480979.2, 161485850.8] - result of extrapolation might be afflicted with large numerical uncertainty.
# ** radmonfix: warning (Extrapolation), Evaluating OBT-MET fit polynomial at x=161485981.9 which is outside the time correlation\
#     data abscissa range [161480979.2, 161485850.8] - result of extrapolation might be afflicted with large numerical uncertainty.
# ** radmonfix: warning (Extrapolation), Evaluating OBT-MET fit polynomial at x=161485985.9 which is outside the time correlation\
#     data abscissa range [161480979.2, 161485850.8] - result of extrapolation might be afflicted with large numerical uncertainty.
# ** radmonfix: warning (Extrapolation), Evaluating OBT-MET fit polynomial at x=161485989.9 which is outside the time correlation\
#     data abscissa range [161480979.2, 161485850.8] - result of extrapolation might be afflicted with large numerical uncertainty.
# radmonfix:- Setting DATE-END...
# ** radmonfix: warning (SummaryOfWarnings), 
# warning Extrapolation silently occurred 266 times 
# # [INFO] [2024-11-30T23:53:07] Task Run Time radmonfix 0.0873429775238037s
#
# [COMMAND] [2024-11-30T23:53:07]
cp /lhome/jperea/ppsdev/pcms3/src/pipeline/etc/EPICModes.fits \
/scratch/226556.1.all.q/xmm/ppsprod/229701/intermediate/GlobalHK-all-1-Observing_modes_Pileup_and_OoT_data-X00000000000000.fits
# # [INFO] [2024-11-30T23:53:07] System RV 0
# # [INFO] [2024-11-30T23:53:07] Copied EPIC Observing modes table, Pileup data and OoT data table in place
# [COMMAND] [2024-11-30T23:53:07]
cp /lhome/jperea/ppsdev/pcms3/src/pipeline/etc/ecfs.fits \
/scratch/226556.1.all.q/xmm/ppsprod/229701/intermediate/GlobalHK-all-1-Energy_Conversion_Factors-X00000000000000.fits
# # [INFO] [2024-11-30T23:53:07] System RV 0
# [COMMAND] [2024-11-30T23:53:07]
cp /lhome/jperea/ppsdev/pcms3/src/pipeline/etc/ecfgrid.fits.gz \
/scratch/226556.1.all.q/xmm/ppsprod/229701/intermediate/GlobalHK-all-1-Energy_Conversion_Factors_Grid-X00000000000000.fits
# # [INFO] [2024-11-30T23:53:07] System RV 0
# [COMMAND] [2024-11-30T23:53:07]
cp /lhome/jperea/ppsdev/pcms3/src/pipeline/etc/fluxgrid.fits.gz \
/scratch/226556.1.all.q/xmm/ppsprod/229701/intermediate/GlobalHK-all-1-Flux_Grid-X00000000000000.fits
# # [INFO] [2024-11-30T23:53:07] System RV 0
# # [INFO] [2024-11-30T23:53:07] Module name: ExpChooser
# # [INFO] [2024-11-30T23:53:07] Instrument: emos1
# # [INFO] [2024-11-30T23:53:07] Stream no.: 0001
# # [INFO] [2024-11-30T23:53:07] Module version number: 1.38
# # [INFO] [2024-11-30T23:53:07] Checking exposure S001 for processability
# # [INFO] [2024-11-30T23:53:07] Filter: CalClosed
# # [INFO] [2024-11-30T23:53:07] Instrument mode: PrimeFullWindow
# # [INFO] [2024-11-30T23:53:07] Exposure duration: 2921
# # [INFO] [2024-11-30T23:53:07] Exposure ignored due to invalid or unsupported filter
# # [INFO] [2024-11-30T23:53:07] Module name: ExpChooser
# # [INFO] [2024-11-30T23:53:07] Instrument: emos2
# # [INFO] [2024-11-30T23:53:07] Stream no.: 0001
# # [INFO] [2024-11-30T23:53:07] Module version number: 1.38
# # [INFO] [2024-11-30T23:53:07] Checking exposure S002 for processability
# # [INFO] [2024-11-30T23:53:07] Filter: CalClosed
# # [INFO] [2024-11-30T23:53:07] Instrument mode: PrimeFullWindow
# # [INFO] [2024-11-30T23:53:07] Exposure duration: 2909
# # [INFO] [2024-11-30T23:53:07] Exposure ignored due to invalid or unsupported filter
