
#!/bin/sh
if [ ! "$SAS_ODFDIR" ]; then
echo ""
echo "Please set the SAS_ODFDIR environment variable to point at the directory"
echo "containing the ODF files for this observation."
echo ""
exit 1
fi
# # [INFO] [2024-11-30T23:36:34] Module name: VerifyODF
# # [INFO] [2024-11-30T23:36:34] Instrument: all
# # [INFO] [2024-11-30T23:36:34] Stream no.: 0001
# # [INFO] [2024-11-30T23:36:34] Module version number: 1.18
# # [INFO] [2024-11-30T23:36:34] Version of odfingest used was 3.33.1
# # [INFO] [2024-11-30T23:36:34] Module name: MakeCIF
# # [INFO] [2024-11-30T23:36:34] Instrument: all
# # [INFO] [2024-11-30T23:36:34] Stream no.: 0001
# # [INFO] [2024-11-30T23:36:34] Module version number: 1.23
# # [INFO] [2024-11-30T23:36:34] Observation start defined as >2021-06-03T18:30:57.000<
# # [INFO] [2024-11-30T23:36:34] Processing date defined as >2024-12-01T00:36:34<
# [COMMAND] [2024-11-30T23:36:34]
export SAS_MEMORY_MODEL=high
# [COMMAND] [2024-11-30T23:36:34]
export SAS_RAND_SEED=0864010201
# # [INFO] [2024-11-30T23:36:34] ## DEBUG ModuleResources: SAS_RAND_SEED set: 0864010201
# [COMMAND] [2024-11-30T23:36:34]
cifbuild analysisdate=2024-12-01T00:36:34 calindexset=product/P0864010201OBX000CALIND0000.FIT fullpath=no \
observationdate=2021-06-03T18:30:57.000 withccfpath=no -w 10
# # [OUTPUT] [2024-11-30T23:37:01]
# # [INFO] [2024-11-30T23:37:01] Task Run Time cifbuild 27.3505070209503s
#
# [COMMAND] [2024-11-30T23:37:01]
export SAS_MEMORY_MODEL=high
# [COMMAND] [2024-11-30T23:37:01]
export SAS_RAND_SEED=0864010201
# # [INFO] [2024-11-30T23:37:01] ## DEBUG ModuleResources: SAS_RAND_SEED set: 0864010201
# [COMMAND] [2024-11-30T23:37:01]
addattribute attributecomment="\"Telescope (mission) name\" \"DEC of instrument pointing\" \"Name of observed object\" \"Observation \
identifier\" \"RA of instrument pointing (degrees)\" \"Observation mode (pointing or slew)\" \"Date observations ended\" \"Name of \
PI\" \"Date observations were made\"" attributename="TELESCOP DEC_PNT OBJECT OBS_ID RA_PNT OBS_MODE DATE-END OBSERVER DATE-OBS" \
attributetype="string real string string real string string string string" realvalue="\"0.6447222\" \"155.9486655\"" \
set=product/P0864010201OBX000CALIND0000.FIT stringvalue="\"XMM\" \"PSR J1023+0038\" \"0864010201\" \"POINTED\" \
\"2021-06-03T19:44:02.000\" \"Dr Sergio Campana\" \"2021-06-03T18:30:57.000\"" -w 10
# # [OUTPUT] [2024-11-30T23:37:01]
# # [INFO] [2024-11-30T23:37:01] Task Run Time addattribute 0.0462977886199951s
#
# [COMMAND] [2024-11-30T23:37:01]
cp /scratch/225508.1.all.q/xmm/ppsprod/228654/product/P0864010201OBX000CALIND0000.FIT \
/scratch/225508.1.all.q/xmm/ppsprod/228654/intermediate/ccf.cif
# # [INFO] [2024-11-30T23:37:01] System RV 0
# # [INFO] [2024-11-30T23:37:01] Module name: GlobalHK
# # [INFO] [2024-11-30T23:37:01] Instrument: all
# # [INFO] [2024-11-30T23:37:01] Stream no.: 0001
# # [INFO] [2024-11-30T23:37:01] Module version number: 1.81
# [COMMAND] [2024-11-30T23:37:01]
export SAS_MEMORY_MODEL=high
# [COMMAND] [2024-11-30T23:37:01]
export SAS_RAND_SEED=0864010201
# # [INFO] [2024-11-30T23:37:01] ## DEBUG ModuleResources: SAS_RAND_SEED set: 0864010201
# [COMMAND] [2024-11-30T23:37:01]
preqgti preqgtifile=intermediate/GlobalHK-all-1-Attitude_GTI-X00000000000000.fits -w 10
# # [OUTPUT] [2024-11-30T23:37:03] ** preqgti::atthkgen: warning (NoAttitude), The attitude was requested for time 739125854.184\
#     which is more than 20 s outside the period for which the attitude is known (closest time is -31 s away).
# ** preqgti::atthkgen: warning (NoAttitude), The attitude was requested for time 739125854.184 which is more than 20 s outside the\
#     period for which the attitude is known (closest time is -31 s away).
# ** preqgti::atthkgen: warning (NoAttitude), The attitude was requested for time 739125855.184 which is more than 20 s outside the\
#     period for which the attitude is known (closest time is -30 s away).
# ** preqgti::atthkgen: warning (NoAttitude), The attitude was requested for time 739125855.184 which is more than 20 s outside the\
#     period for which the attitude is known (closest time is -30 s away).
# ** preqgti::atthkgen: warning (NoAttitude), The attitude was requested for time 739125856.184 which is more than 20 s outside the\
#     period for which the attitude is known (closest time is -29 s away).
# ** preqgti::atthkgen: warning (NoAttitude), The attitude was requested for time 739125856.184 which is more than 20 s outside the\
#     period for which the attitude is known (closest time is -29 s away).
# ** preqgti::atthkgen: warning (NoAttitude), The attitude was requested for time 739125857.184 which is more than 20 s outside the\
#     period for which the attitude is known (closest time is -28 s away).
# ** preqgti::atthkgen: warning (NoAttitude), The attitude was requested for time 739125857.184 which is more than 20 s outside the\
#     period for which the attitude is known (closest time is -28 s away).
# ** preqgti::atthkgen: warning (NoAttitude), The attitude was requested for time 739125858.184 which is more than 20 s outside the\
#     period for which the attitude is known (closest time is -27 s away).
# ** preqgti::atthkgen: warning (NoAttitude), The attitude was requested for time 739125858.184 which is more than 20 s outside the\
#     period for which the attitude is known (closest time is -27 s away).
# ** preqgti: warning (SummaryOfWarnings), 
# warning NoAttitude silently occurred 106194 times 
# # [INFO] [2024-11-30T23:37:03] Task Run Time preqgti 2.09957218170166s
#
# [COMMAND] [2024-11-30T23:37:03]
export SAS_MEMORY_MODEL=high
# [COMMAND] [2024-11-30T23:37:03]
export SAS_RAND_SEED=0864010201
# # [INFO] [2024-11-30T23:37:03] ## DEBUG ModuleResources: SAS_RAND_SEED set: 0864010201
# [COMMAND] [2024-11-30T23:37:03]
atthkgen atthkset=product/P0864010201OBX000ATTTSR0000.FIT preqgtifile=intermediate/GlobalHK-all-1-Attitude_GTI-X00000000000000.fits \
timestep=1 withpreqgti=no -w 10
# # [OUTPUT] [2024-11-30T23:37:03]
# # [INFO] [2024-11-30T23:37:03] Task Run Time atthkgen 0.140651941299438s
#
# [COMMAND] [2024-11-30T23:37:03]
export SAS_MEMORY_MODEL=high
# [COMMAND] [2024-11-30T23:37:03]
export SAS_RAND_SEED=0864010201
# # [INFO] [2024-11-30T23:37:03] ## DEBUG ModuleResources: SAS_RAND_SEED set: 0864010201
# [COMMAND] [2024-11-30T23:37:03]
orbit outfile=product/P0864010201OBX000ORBTSR0000.FIT timestep=1 useobsid=yes -w 10
# # [OUTPUT] [2024-11-30T23:37:04] orbit:- Output FITS Orbit timeseries: product/P0864010201OBX000ORBTSR0000.FIT
# orbit:- Binsize (timestep) of output): 1
# orbit:- Use OBSID data or whole orbit? T 
# # [INFO] [2024-11-30T23:37:04] Task Run Time orbit 0.324552059173584s
#
# [COMMAND] [2024-11-30T23:37:04]
export SAS_MEMORY_MODEL=high
# [COMMAND] [2024-11-30T23:37:04]
export SAS_RAND_SEED=0864010201
# # [INFO] [2024-11-30T23:37:04] ## DEBUG ModuleResources: SAS_RAND_SEED set: 0864010201
# [COMMAND] [2024-11-30T23:37:04]
radmonfix output=product/P0864010201OBX000RADMON0000.FIT radmonlist=odf/3935_0864010201_RMX00100ECX.FIT withoutputfile=yes -w 10
# # [OUTPUT] [2024-11-30T23:37:04] ** radmonfix: warning (Extrapolation), Evaluating OBT-MET fit polynomial at x=210425785.9 which\
#     is outside the time correlation data abscissa range [210419333.4, 210425685] - result of extrapolation might be afflicted with\
#     large numerical uncertainty.
# ** radmonfix: warning (Extrapolation), Evaluating OBT-MET fit polynomial at x=210425789.9 which is outside the time correlation\
#     data abscissa range [210419333.4, 210425685] - result of extrapolation might be afflicted with large numerical uncertainty.
# ** radmonfix: warning (Extrapolation), Evaluating OBT-MET fit polynomial at x=210425793.9 which is outside the time correlation\
#     data abscissa range [210419333.4, 210425685] - result of extrapolation might be afflicted with large numerical uncertainty.
# ** radmonfix: warning (Extrapolation), Evaluating OBT-MET fit polynomial at x=210425797.9 which is outside the time correlation\
#     data abscissa range [210419333.4, 210425685] - result of extrapolation might be afflicted with large numerical uncertainty.
# ** radmonfix: warning (Extrapolation), Evaluating OBT-MET fit polynomial at x=210425801.9 which is outside the time correlation\
#     data abscissa range [210419333.4, 210425685] - result of extrapolation might be afflicted with large numerical uncertainty.
# ** radmonfix: warning (Extrapolation), Evaluating OBT-MET fit polynomial at x=210425805.9 which is outside the time correlation\
#     data abscissa range [210419333.4, 210425685] - result of extrapolation might be afflicted with large numerical uncertainty.
# ** radmonfix: warning (Extrapolation), Evaluating OBT-MET fit polynomial at x=210425809.9 which is outside the time correlation\
#     data abscissa range [210419333.4, 210425685] - result of extrapolation might be afflicted with large numerical uncertainty.
# ** radmonfix: warning (Extrapolation), Evaluating OBT-MET fit polynomial at x=210425813.9 which is outside the time correlation\
#     data abscissa range [210419333.4, 210425685] - result of extrapolation might be afflicted with large numerical uncertainty.
# ** radmonfix: warning (Extrapolation), Evaluating OBT-MET fit polynomial at x=210425817.9 which is outside the time correlation\
#     data abscissa range [210419333.4, 210425685] - result of extrapolation might be afflicted with large numerical uncertainty.
# ** radmonfix: warning (Extrapolation), Evaluating OBT-MET fit polynomial at x=210425821.9 which is outside the time correlation\
#     data abscissa range [210419333.4, 210425685] - result of extrapolation might be afflicted with large numerical uncertainty.
# radmonfix:- Setting DATE-END...
# ** radmonfix: warning (SummaryOfWarnings), 
# warning Extrapolation silently occurred 157 times 
# # [INFO] [2024-11-30T23:37:04] Task Run Time radmonfix 0.0830080509185791s
#
# [COMMAND] [2024-11-30T23:37:04]
cp /lhome/jperea/ppsdev/pcms3/src/pipeline/etc/EPICModes.fits \
/scratch/225508.1.all.q/xmm/ppsprod/228654/intermediate/GlobalHK-all-1-Observing_modes_Pileup_and_OoT_data-X00000000000000.fits
# # [INFO] [2024-11-30T23:37:04] System RV 0
# # [INFO] [2024-11-30T23:37:04] Copied EPIC Observing modes table, Pileup data and OoT data table in place
# [COMMAND] [2024-11-30T23:37:04]
cp /lhome/jperea/ppsdev/pcms3/src/pipeline/etc/ecfs.fits \
/scratch/225508.1.all.q/xmm/ppsprod/228654/intermediate/GlobalHK-all-1-Energy_Conversion_Factors-X00000000000000.fits
# # [INFO] [2024-11-30T23:37:04] System RV 0
# [COMMAND] [2024-11-30T23:37:04]
cp /lhome/jperea/ppsdev/pcms3/src/pipeline/etc/ecfgrid.fits.gz \
/scratch/225508.1.all.q/xmm/ppsprod/228654/intermediate/GlobalHK-all-1-Energy_Conversion_Factors_Grid-X00000000000000.fits
# # [INFO] [2024-11-30T23:37:04] System RV 0
# [COMMAND] [2024-11-30T23:37:04]
cp /lhome/jperea/ppsdev/pcms3/src/pipeline/etc/fluxgrid.fits.gz \
/scratch/225508.1.all.q/xmm/ppsprod/228654/intermediate/GlobalHK-all-1-Flux_Grid-X00000000000000.fits
# # [INFO] [2024-11-30T23:37:04] System RV 0
# # [INFO] [2024-11-30T23:37:04] Module name: ExpChooser
# # [INFO] [2024-11-30T23:37:04] Instrument: emos1
# # [INFO] [2024-11-30T23:37:04] Stream no.: 0001
# # [INFO] [2024-11-30T23:37:04] Module version number: 1.38
# # [INFO] [2024-11-30T23:37:04] Checking exposure S001 for processability
# # [INFO] [2024-11-30T23:37:04] Filter: CalClosed
# # [INFO] [2024-11-30T23:37:04] Instrument mode: PrimeFullWindow
# # [INFO] [2024-11-30T23:37:04] Exposure duration: 4384
# # [INFO] [2024-11-30T23:37:04] Exposure ignored due to invalid or unsupported filter
# # [INFO] [2024-11-30T23:37:04] Module name: ExpChooser
# # [INFO] [2024-11-30T23:37:04] Instrument: emos2
# # [INFO] [2024-11-30T23:37:04] Stream no.: 0001
# # [INFO] [2024-11-30T23:37:04] Module version number: 1.38
# # [INFO] [2024-11-30T23:37:04] Checking exposure S002 for processability
# # [INFO] [2024-11-30T23:37:04] Filter: CalClosed
# # [INFO] [2024-11-30T23:37:04] Instrument mode: PrimeFullWindow
# # [INFO] [2024-11-30T23:37:04] Exposure duration: 4365
# # [INFO] [2024-11-30T23:37:04] Exposure ignored due to invalid or unsupported filter
