
#!/bin/sh
if [ ! "$SAS_ODFDIR" ]; then
echo ""
echo "Please set the SAS_ODFDIR environment variable to point at the directory"
echo "containing the ODF files for this observation."
echo ""
exit 1
fi
# # [INFO] [2024-11-30T23:52:45] Module name: VerifyODF
# # [INFO] [2024-11-30T23:52:45] Instrument: all
# # [INFO] [2024-11-30T23:52:45] Stream no.: 0001
# # [INFO] [2024-11-30T23:52:45] Module version number: 1.18
# # [INFO] [2024-11-30T23:52:45] Version of odfingest used was 3.33.1
# # [INFO] [2024-11-30T23:52:45] Module name: MakeCIF
# # [INFO] [2024-11-30T23:52:45] Instrument: all
# # [INFO] [2024-11-30T23:52:45] Stream no.: 0001
# # [INFO] [2024-11-30T23:52:45] Module version number: 1.23
# # [INFO] [2024-11-30T23:52:45] Observation start defined as >2021-04-18T21:27:46.000<
# # [INFO] [2024-11-30T23:52:45] Processing date defined as >2024-12-01T00:52:45<
# [COMMAND] [2024-11-30T23:52:45]
export SAS_MEMORY_MODEL=high
# [COMMAND] [2024-11-30T23:52:45]
export SAS_RAND_SEED=0882340901
# # [INFO] [2024-11-30T23:52:45] ## DEBUG ModuleResources: SAS_RAND_SEED set: 0882340901
# [COMMAND] [2024-11-30T23:52:45]
cifbuild analysisdate=2024-12-01T00:52:45 calindexset=product/P0882340901OBX000CALIND0000.FIT fullpath=no \
observationdate=2021-04-18T21:27:46.000 withccfpath=no -w 10
# # [OUTPUT] [2024-11-30T23:53:15]
# # [INFO] [2024-11-30T23:53:15] Task Run Time cifbuild 29.7604949474335s
#
# [COMMAND] [2024-11-30T23:53:15]
export SAS_MEMORY_MODEL=high
# [COMMAND] [2024-11-30T23:53:15]
export SAS_RAND_SEED=0882340901
# # [INFO] [2024-11-30T23:53:15] ## DEBUG ModuleResources: SAS_RAND_SEED set: 0882340901
# [COMMAND] [2024-11-30T23:53:15]
addattribute attributecomment="\"Telescope (mission) name\" \"Name of observed object\" \"Date observations ended\" \"DEC of \
instrument pointing\" \"Observation mode (pointing or slew)\" \"Name of PI\" \"RA of instrument pointing (degrees)\" \"Date \
observations were made\" \"Observation identifier\"" attributename="TELESCOP OBJECT DATE-END DEC_PNT OBS_MODE OBSERVER RA_PNT \
DATE-OBS OBS_ID" attributetype="string string string real string string real string string" realvalue="\"58.7942777\" \
\"219.0919995\"" set=product/P0882340901OBX000CALIND0000.FIT stringvalue="\"XMM\" \"Mrk 817\" \"2021-04-18T22:15:41.000\" \
\"POINTED\" \"Prof Erin Kara\" \"2021-04-18T21:27:46.000\" \"0882340901\"" -w 10
# # [OUTPUT] [2024-11-30T23:53:15]
# # [INFO] [2024-11-30T23:53:15] Task Run Time addattribute 0.062251091003418s
#
# [COMMAND] [2024-11-30T23:53:15]
cp /scratch/226596.1.all.q/xmm/ppsprod/229740/product/P0882340901OBX000CALIND0000.FIT \
/scratch/226596.1.all.q/xmm/ppsprod/229740/intermediate/ccf.cif
# # [INFO] [2024-11-30T23:53:15] System RV 0
# # [INFO] [2024-11-30T23:53:15] Module name: GlobalHK
# # [INFO] [2024-11-30T23:53:15] Instrument: all
# # [INFO] [2024-11-30T23:53:15] Stream no.: 0001
# # [INFO] [2024-11-30T23:53:15] Module version number: 1.81
# [COMMAND] [2024-11-30T23:53:15]
export SAS_MEMORY_MODEL=high
# [COMMAND] [2024-11-30T23:53:15]
export SAS_RAND_SEED=0882340901
# # [INFO] [2024-11-30T23:53:15] ## DEBUG ModuleResources: SAS_RAND_SEED set: 0882340901
# [COMMAND] [2024-11-30T23:53:15]
preqgti preqgtifile=intermediate/GlobalHK-all-1-Attitude_GTI-X00000000000000.fits -w 10
# # [OUTPUT] [2024-11-30T23:53:21] ** preqgti: warning (TemporalOverlapInAHF), Temporal overlap of 0.490002s between AHF entries 93\
#     (2021-04-18T21:19:49.999) and 94 (2021-04-18T21:20:28.999) - adjusting duration of entry 93 accordingly
# ** preqgti::atthkgen: warning (NoAttitude), The attitude was requested for time 735168058.184 which is more than 20 s outside the\
#     period for which the attitude is known (closest time is -40 s away).
# ** preqgti::atthkgen: warning (NoAttitude), The attitude was requested for time 735168058.184 which is more than 20 s outside the\
#     period for which the attitude is known (closest time is -40 s away).
# ** preqgti::atthkgen: warning (NoAttitude), The attitude was requested for time 735168059.184 which is more than 20 s outside the\
#     period for which the attitude is known (closest time is -39 s away).
# ** preqgti::atthkgen: warning (NoAttitude), The attitude was requested for time 735168059.184 which is more than 20 s outside the\
#     period for which the attitude is known (closest time is -39 s away).
# ** preqgti::atthkgen: warning (NoAttitude), The attitude was requested for time 735168060.184 which is more than 20 s outside the\
#     period for which the attitude is known (closest time is -38 s away).
# ** preqgti::atthkgen: warning (NoAttitude), The attitude was requested for time 735168060.184 which is more than 20 s outside the\
#     period for which the attitude is known (closest time is -38 s away).
# ** preqgti::atthkgen: warning (NoAttitude), The attitude was requested for time 735168061.184 which is more than 20 s outside the\
#     period for which the attitude is known (closest time is -37 s away).
# ** preqgti::atthkgen: warning (NoAttitude), The attitude was requested for time 735168061.184 which is more than 20 s outside the\
#     period for which the attitude is known (closest time is -37 s away).
# ** preqgti::atthkgen: warning (NoAttitude), The attitude was requested for time 735168062.184 which is more than 20 s outside the\
#     period for which the attitude is known (closest time is -36 s away).
# ** preqgti::atthkgen: warning (NoAttitude), The attitude was requested for time 735168062.184 which is more than 20 s outside the\
#     period for which the attitude is known (closest time is -36 s away).
# ** preqgti: warning (SummaryOfWarnings), 
# warning NoAttitude silently occurred 266842 times 
# # [INFO] [2024-11-30T23:53:21] Task Run Time preqgti 5.63045191764832s
#
# [COMMAND] [2024-11-30T23:53:21]
export SAS_MEMORY_MODEL=high
# [COMMAND] [2024-11-30T23:53:21]
export SAS_RAND_SEED=0882340901
# # [INFO] [2024-11-30T23:53:21] ## DEBUG ModuleResources: SAS_RAND_SEED set: 0882340901
# [COMMAND] [2024-11-30T23:53:21]
atthkgen atthkset=product/P0882340901OBX000ATTTSR0000.FIT preqgtifile=intermediate/GlobalHK-all-1-Attitude_GTI-X00000000000000.fits \
timestep=1 withpreqgti=no -w 10
# # [OUTPUT] [2024-11-30T23:53:21]
# # [INFO] [2024-11-30T23:53:21] Task Run Time atthkgen 0.163635969161987s
#
# [COMMAND] [2024-11-30T23:53:21]
export SAS_MEMORY_MODEL=high
# [COMMAND] [2024-11-30T23:53:21]
export SAS_RAND_SEED=0882340901
# # [INFO] [2024-11-30T23:53:21] ## DEBUG ModuleResources: SAS_RAND_SEED set: 0882340901
# [COMMAND] [2024-11-30T23:53:21]
orbit outfile=product/P0882340901OBX000ORBTSR0000.FIT timestep=1 useobsid=yes -w 10
# # [OUTPUT] [2024-11-30T23:53:21] orbit:- Output FITS Orbit timeseries: product/P0882340901OBX000ORBTSR0000.FIT
# orbit:- Binsize (timestep) of output): 1
# orbit:- Use OBSID data or whole orbit? T 
# # [INFO] [2024-11-30T23:53:21] Task Run Time orbit 0.229651212692261s
#
# [COMMAND] [2024-11-30T23:53:21]
export SAS_MEMORY_MODEL=high
# [COMMAND] [2024-11-30T23:53:21]
export SAS_RAND_SEED=0882340901
# # [INFO] [2024-11-30T23:53:21] ## DEBUG ModuleResources: SAS_RAND_SEED set: 0882340901
# [COMMAND] [2024-11-30T23:53:21]
radmonfix output=product/P0882340901OBX000RADMON0000.FIT radmonlist=odf/3912_0882340901_RMX00100ECX.FIT withoutputfile=yes -w 10
# # [OUTPUT] [2024-11-30T23:53:21] ** radmonfix: warning (Extrapolation), Evaluating OBT-MET fit polynomial at x=206460661.9 which\
#     is outside the time correlation data abscissa range [206455607.6, 206460231.5] - result of extrapolation might be afflicted\
#     with large numerical uncertainty.
# ** radmonfix: warning (Extrapolation), Evaluating OBT-MET fit polynomial at x=206460665.9 which is outside the time correlation\
#     data abscissa range [206455607.6, 206460231.5] - result of extrapolation might be afflicted with large numerical uncertainty.
# ** radmonfix: warning (Extrapolation), Evaluating OBT-MET fit polynomial at x=206460669.9 which is outside the time correlation\
#     data abscissa range [206455607.6, 206460231.5] - result of extrapolation might be afflicted with large numerical uncertainty.
# ** radmonfix: warning (Extrapolation), Evaluating OBT-MET fit polynomial at x=206460673.9 which is outside the time correlation\
#     data abscissa range [206455607.6, 206460231.5] - result of extrapolation might be afflicted with large numerical uncertainty.
# ** radmonfix: warning (Extrapolation), Evaluating OBT-MET fit polynomial at x=206460677.9 which is outside the time correlation\
#     data abscissa range [206455607.6, 206460231.5] - result of extrapolation might be afflicted with large numerical uncertainty.
# ** radmonfix: warning (Extrapolation), Evaluating OBT-MET fit polynomial at x=206460681.9 which is outside the time correlation\
#     data abscissa range [206455607.6, 206460231.5] - result of extrapolation might be afflicted with large numerical uncertainty.
# ** radmonfix: warning (Extrapolation), Evaluating OBT-MET fit polynomial at x=206460685.9 which is outside the time correlation\
#     data abscissa range [206455607.6, 206460231.5] - result of extrapolation might be afflicted with large numerical uncertainty.
# ** radmonfix: warning (Extrapolation), Evaluating OBT-MET fit polynomial at x=206460689.9 which is outside the time correlation\
#     data abscissa range [206455607.6, 206460231.5] - result of extrapolation might be afflicted with large numerical uncertainty.
# ** radmonfix: warning (Extrapolation), Evaluating OBT-MET fit polynomial at x=206460693.9 which is outside the time correlation\
#     data abscissa range [206455607.6, 206460231.5] - result of extrapolation might be afflicted with large numerical uncertainty.
# ** radmonfix: warning (Extrapolation), Evaluating OBT-MET fit polynomial at x=206460697.9 which is outside the time correlation\
#     data abscissa range [206455607.6, 206460231.5] - result of extrapolation might be afflicted with large numerical uncertainty.
# radmonfix:- Setting DATE-END...
# ** radmonfix: warning (SummaryOfWarnings), 
# warning Extrapolation silently occurred 118 times 
# # [INFO] [2024-11-30T23:53:21] Task Run Time radmonfix 0.108526945114136s
#
# [COMMAND] [2024-11-30T23:53:21]
cp /lhome/jperea/ppsdev/pcms3/src/pipeline/etc/EPICModes.fits \
/scratch/226596.1.all.q/xmm/ppsprod/229740/intermediate/GlobalHK-all-1-Observing_modes_Pileup_and_OoT_data-X00000000000000.fits
# # [INFO] [2024-11-30T23:53:21] System RV 0
# # [INFO] [2024-11-30T23:53:21] Copied EPIC Observing modes table, Pileup data and OoT data table in place
# [COMMAND] [2024-11-30T23:53:21]
cp /lhome/jperea/ppsdev/pcms3/src/pipeline/etc/ecfs.fits \
/scratch/226596.1.all.q/xmm/ppsprod/229740/intermediate/GlobalHK-all-1-Energy_Conversion_Factors-X00000000000000.fits
# # [INFO] [2024-11-30T23:53:21] System RV 0
# [COMMAND] [2024-11-30T23:53:21]
cp /lhome/jperea/ppsdev/pcms3/src/pipeline/etc/ecfgrid.fits.gz \
/scratch/226596.1.all.q/xmm/ppsprod/229740/intermediate/GlobalHK-all-1-Energy_Conversion_Factors_Grid-X00000000000000.fits
# # [INFO] [2024-11-30T23:53:21] System RV 0
# [COMMAND] [2024-11-30T23:53:21]
cp /lhome/jperea/ppsdev/pcms3/src/pipeline/etc/fluxgrid.fits.gz \
/scratch/226596.1.all.q/xmm/ppsprod/229740/intermediate/GlobalHK-all-1-Flux_Grid-X00000000000000.fits
# # [INFO] [2024-11-30T23:53:21] System RV 0
# # [INFO] [2024-11-30T23:53:21] Module name: ExpChooser
# # [INFO] [2024-11-30T23:53:21] Instrument: emos2
# # [INFO] [2024-11-30T23:53:21] Stream no.: 0001
# # [INFO] [2024-11-30T23:53:21] Module version number: 1.38
# # [INFO] [2024-11-30T23:53:21] Checking exposure S002 for processability
# # [INFO] [2024-11-30T23:53:21] Filter: CalClosed
# # [INFO] [2024-11-30T23:53:21] Instrument mode: PrimeFullWindow
# # [INFO] [2024-11-30T23:53:21] Exposure duration: 2653
# # [INFO] [2024-11-30T23:53:21] Exposure ignored due to invalid or unsupported filter
# # [INFO] [2024-11-30T23:53:21] Module name: ExpChooser
# # [INFO] [2024-11-30T23:53:21] Instrument: epn
# # [INFO] [2024-11-30T23:53:21] Stream no.: 0001
# # [INFO] [2024-11-30T23:53:21] Module version number: 1.38
# # [INFO] [2024-11-30T23:53:21] Checking exposure S003 for processability
# # [INFO] [2024-11-30T23:53:21] Filter: CalClosed
# # [INFO] [2024-11-30T23:53:21] Instrument mode: PrimeFullWindow
# # [INFO] [2024-11-30T23:53:21] Exposure duration: 805
# # [INFO] [2024-11-30T23:53:21] Exposure ignored due to invalid or unsupported filter
# # [INFO] [2024-11-30T23:53:21] Module name: ExpChooser
# # [INFO] [2024-11-30T23:53:21] Instrument: epn
# # [INFO] [2024-11-30T23:53:21] Stream no.: 0002
# # [INFO] [2024-11-30T23:53:21] Module version number: 1.38
# # [INFO] [2024-11-30T23:53:21] Checking exposure U002 for processability
# # [INFO] [2024-11-30T23:53:21] Exposure ignored due to lack of event files
# # [INFO] [2024-11-30T23:53:21] Module name: ExpChooser
# # [INFO] [2024-11-30T23:53:21] Instrument: epn
# # [INFO] [2024-11-30T23:53:21] Stream no.: 0003
# # [INFO] [2024-11-30T23:53:21] Module version number: 1.38
# # [INFO] [2024-11-30T23:53:21] Checking exposure U003 for processability
# # [INFO] [2024-11-30T23:53:21] Exposure ignored due to lack of event files
# # [INFO] [2024-11-30T23:53:21] Module name: ExpChooser
# # [INFO] [2024-11-30T23:53:21] Instrument: epn
# # [INFO] [2024-11-30T23:53:21] Stream no.: 0004
# # [INFO] [2024-11-30T23:53:21] Module version number: 1.38
# # [INFO] [2024-11-30T23:53:21] Checking exposure U004 for processability
# # [INFO] [2024-11-30T23:53:21] Exposure ignored due to lack of event files
# # [INFO] [2024-11-30T23:53:21] Module name: ExpChooser
# # [INFO] [2024-11-30T23:53:21] Instrument: epn
# # [INFO] [2024-11-30T23:53:21] Stream no.: 0005
# # [INFO] [2024-11-30T23:53:21] Module version number: 1.38
# # [INFO] [2024-11-30T23:53:21] Checking exposure U005 for processability
# # [INFO] [2024-11-30T23:53:21] Exposure ignored due to lack of event files
# # [INFO] [2024-11-30T23:53:21] Module name: ExpChooser
# # [INFO] [2024-11-30T23:53:21] Instrument: epn
# # [INFO] [2024-11-30T23:53:21] Stream no.: 0006
# # [INFO] [2024-11-30T23:53:21] Module version number: 1.38
# # [INFO] [2024-11-30T23:53:21] Checking exposure U006 for processability
# # [INFO] [2024-11-30T23:53:21] Exposure ignored due to lack of event files
# # [INFO] [2024-11-30T23:53:21] Module name: ExpChooser
# # [INFO] [2024-11-30T23:53:21] Instrument: epn
# # [INFO] [2024-11-30T23:53:21] Stream no.: 0007
# # [INFO] [2024-11-30T23:53:21] Module version number: 1.38
# # [INFO] [2024-11-30T23:53:21] Checking exposure U007 for processability
# # [INFO] [2024-11-30T23:53:21] Exposure ignored due to lack of event files
# # [INFO] [2024-11-30T23:53:21] Module name: ExpChooser
# # [INFO] [2024-11-30T23:53:21] Instrument: epn
# # [INFO] [2024-11-30T23:53:21] Stream no.: 0008
# # [INFO] [2024-11-30T23:53:21] Module version number: 1.38
# # [INFO] [2024-11-30T23:53:21] Checking exposure U008 for processability
# # [INFO] [2024-11-30T23:53:21] Exposure ignored due to lack of event files
# # [INFO] [2024-11-30T23:53:21] Module name: ExpChooser
# # [INFO] [2024-11-30T23:53:21] Instrument: epn
# # [INFO] [2024-11-30T23:53:21] Stream no.: 0009
# # [INFO] [2024-11-30T23:53:21] Module version number: 1.38
# # [INFO] [2024-11-30T23:53:21] Checking exposure U009 for processability
# # [INFO] [2024-11-30T23:53:21] Exposure ignored due to lack of event files
# # [INFO] [2024-11-30T23:53:21] Module name: ExpChooser
# # [INFO] [2024-11-30T23:53:21] Instrument: epn
# # [INFO] [2024-11-30T23:53:21] Stream no.: 0010
# # [INFO] [2024-11-30T23:53:21] Module version number: 1.38
# # [INFO] [2024-11-30T23:53:21] Checking exposure U010 for processability
# # [INFO] [2024-11-30T23:53:21] Exposure ignored due to lack of event files
# # [INFO] [2024-11-30T23:53:21] Module name: ExpChooser
# # [INFO] [2024-11-30T23:53:21] Instrument: epn
# # [INFO] [2024-11-30T23:53:21] Stream no.: 0011
# # [INFO] [2024-11-30T23:53:21] Module version number: 1.38
# # [INFO] [2024-11-30T23:53:21] Checking exposure U011 for processability
# # [INFO] [2024-11-30T23:53:21] Exposure ignored due to lack of event files
# # [INFO] [2024-11-30T23:53:21] Module name: ExpChooser
# # [INFO] [2024-11-30T23:53:21] Instrument: epn
# # [INFO] [2024-11-30T23:53:21] Stream no.: 0012
# # [INFO] [2024-11-30T23:53:21] Module version number: 1.38
# # [INFO] [2024-11-30T23:53:21] Checking exposure U012 for processability
# # [INFO] [2024-11-30T23:53:22] Exposure ignored due to lack of event files
# # [INFO] [2024-11-30T23:53:22] Module name: ExpChooser
# # [INFO] [2024-11-30T23:53:22] Instrument: epn
# # [INFO] [2024-11-30T23:53:22] Stream no.: 0013
# # [INFO] [2024-11-30T23:53:22] Module version number: 1.38
# # [INFO] [2024-11-30T23:53:22] Checking exposure U013 for processability
# # [INFO] [2024-11-30T23:53:22] Exposure ignored due to lack of event files
# # [INFO] [2024-11-30T23:53:22] Module name: ExpChooser
# # [INFO] [2024-11-30T23:53:22] Instrument: epn
# # [INFO] [2024-11-30T23:53:22] Stream no.: 0014
# # [INFO] [2024-11-30T23:53:22] Module version number: 1.38
# # [INFO] [2024-11-30T23:53:22] Checking exposure U700 for processability
# # [INFO] [2024-11-30T23:53:22] Exposure ignored due to lack of event files
# # [INFO] [2024-11-30T23:53:22] Module name: ExpChooser
# # [INFO] [2024-11-30T23:53:22] Instrument: emos1
# # [INFO] [2024-11-30T23:53:22] Stream no.: 0001
# # [INFO] [2024-11-30T23:53:22] Module version number: 1.38
# # [INFO] [2024-11-30T23:53:22] Checking exposure S001 for processability
# # [INFO] [2024-11-30T23:53:22] Filter: CalClosed
# # [INFO] [2024-11-30T23:53:22] Instrument mode: PrimeFullWindow
# # [INFO] [2024-11-30T23:53:22] Exposure duration: 2674
# # [INFO] [2024-11-30T23:53:22] Exposure ignored due to invalid or unsupported filter
