
#!/bin/sh
if [ ! "$SAS_ODFDIR" ]; then
echo ""
echo "Please set the SAS_ODFDIR environment variable to point at the directory"
echo "containing the ODF files for this observation."
echo ""
exit 1
fi
# # [INFO] [2024-11-30T23:49:42] Module name: VerifyODF
# # [INFO] [2024-11-30T23:49:42] Instrument: all
# # [INFO] [2024-11-30T23:49:42] Stream no.: 0001
# # [INFO] [2024-11-30T23:49:42] Module version number: 1.18
# # [INFO] [2024-11-30T23:49:42] Version of odfingest used was 3.33.1
# # [INFO] [2024-11-30T23:49:42] Module name: MakeCIF
# # [INFO] [2024-11-30T23:49:42] Instrument: all
# # [INFO] [2024-11-30T23:49:42] Stream no.: 0001
# # [INFO] [2024-11-30T23:49:42] Module version number: 1.23
# # [INFO] [2024-11-30T23:49:42] Observation start defined as >2021-07-17T15:35:24.000<
# # [INFO] [2024-11-30T23:49:42] Processing date defined as >2024-12-01T00:49:42<
# [COMMAND] [2024-11-30T23:49:42]
export SAS_MEMORY_MODEL=high
# [COMMAND] [2024-11-30T23:49:42]
export SAS_RAND_SEED=0882341001
# # [INFO] [2024-11-30T23:49:42] ## DEBUG ModuleResources: SAS_RAND_SEED set: 0882341001
# [COMMAND] [2024-11-30T23:49:42]
cifbuild analysisdate=2024-12-01T00:49:42 calindexset=product/P0882341001OBX000CALIND0000.FIT fullpath=no \
observationdate=2021-07-17T15:35:24.000 withccfpath=no -w 10
# # [OUTPUT] [2024-11-30T23:50:10]
# # [INFO] [2024-11-30T23:50:10] Task Run Time cifbuild 27.8540050983429s
#
# [COMMAND] [2024-11-30T23:50:10]
export SAS_MEMORY_MODEL=high
# [COMMAND] [2024-11-30T23:50:10]
export SAS_RAND_SEED=0882341001
# # [INFO] [2024-11-30T23:50:10] ## DEBUG ModuleResources: SAS_RAND_SEED set: 0882341001
# [COMMAND] [2024-11-30T23:50:10]
addattribute attributecomment="\"Telescope (mission) name\" \"Name of PI\" \"Observation identifier\" \"Date observations were \
made\" \"RA of instrument pointing (degrees)\" \"Name of observed object\" \"Date observations ended\" \"DEC of instrument \
pointing\" \"Observation mode (pointing or slew)\"" attributename="TELESCOP OBSERVER OBS_ID DATE-OBS RA_PNT OBJECT DATE-END DEC_PNT \
OBS_MODE" attributetype="string string string string real string string real string" realvalue="\"219.0919995\" \"58.7942777\"" \
set=product/P0882341001OBX000CALIND0000.FIT stringvalue="\"XMM\" \"Prof Erin Kara\" \"0882341001\" \"2021-07-17T15:35:24.000\" \"Mrk \
817\" \"2021-07-17T18:09:47.000\" \"POINTED\"" -w 10
# # [OUTPUT] [2024-11-30T23:50:10]
# # [INFO] [2024-11-30T23:50:10] Task Run Time addattribute 0.0452878475189209s
#
# [COMMAND] [2024-11-30T23:50:10]
cp /scratch/226291.1.all.q/xmm/ppsprod/229437/product/P0882341001OBX000CALIND0000.FIT \
/scratch/226291.1.all.q/xmm/ppsprod/229437/intermediate/ccf.cif
# # [INFO] [2024-11-30T23:50:10] System RV 0
# # [INFO] [2024-11-30T23:50:10] Module name: GlobalHK
# # [INFO] [2024-11-30T23:50:10] Instrument: all
# # [INFO] [2024-11-30T23:50:10] Stream no.: 0001
# # [INFO] [2024-11-30T23:50:10] Module version number: 1.81
# [COMMAND] [2024-11-30T23:50:10]
export SAS_MEMORY_MODEL=high
# [COMMAND] [2024-11-30T23:50:10]
export SAS_RAND_SEED=0882341001
# # [INFO] [2024-11-30T23:50:10] ## DEBUG ModuleResources: SAS_RAND_SEED set: 0882341001
# [COMMAND] [2024-11-30T23:50:10]
preqgti preqgtifile=intermediate/GlobalHK-all-1-Attitude_GTI-X00000000000000.fits -w 10
# # [OUTPUT] [2024-11-30T23:50:15] ** preqgti::atthkgen: warning (NoAttitude), The attitude was requested for time 742932693.184\
#     which is more than 20 s outside the period for which the attitude is known (closest time is 20.0000001192 s away).
# ** preqgti::atthkgen: warning (NoAttitude), The attitude was requested for time 742932693.184 which is more than 20 s outside the\
#     period for which the attitude is known (closest time is 20.0000001192 s away).
# ** preqgti::atthkgen: warning (NoAttitude), The attitude was requested for time 742932694.184 which is more than 20 s outside the\
#     period for which the attitude is known (closest time is 20.0000001192 s away).
# ** preqgti::atthkgen: warning (NoAttitude), The attitude was requested for time 742932694.184 which is more than 20 s outside the\
#     period for which the attitude is known (closest time is 20.0000001192 s away).
# ** preqgti::atthkgen: warning (NoAttitude), The attitude was requested for time 742932695.184 which is more than 20 s outside the\
#     period for which the attitude is known (closest time is 20.0000001192 s away).
# ** preqgti::atthkgen: warning (NoAttitude), The attitude was requested for time 742932695.184 which is more than 20 s outside the\
#     period for which the attitude is known (closest time is 20.0000001192 s away).
# ** preqgti::atthkgen: warning (NoAttitude), The attitude was requested for time 742932696.184 which is more than 20 s outside the\
#     period for which the attitude is known (closest time is 20.0000001192 s away).
# ** preqgti::atthkgen: warning (NoAttitude), The attitude was requested for time 742932696.184 which is more than 20 s outside the\
#     period for which the attitude is known (closest time is 20.0000001192 s away).
# ** preqgti::atthkgen: warning (NoAttitude), The attitude was requested for time 742932697.184 which is more than 20 s outside the\
#     period for which the attitude is known (closest time is 21.0000001192 s away).
# ** preqgti::atthkgen: warning (NoAttitude), The attitude was requested for time 742932697.184 which is more than 20 s outside the\
#     period for which the attitude is known (closest time is 21.0000001192 s away).
# ** preqgti: warning (SummaryOfWarnings), 
# warning NoAttitude silently occurred 235040 times 
# # [INFO] [2024-11-30T23:50:15] Task Run Time preqgti 4.49055409431458s
#
# [COMMAND] [2024-11-30T23:50:15]
export SAS_MEMORY_MODEL=high
# [COMMAND] [2024-11-30T23:50:15]
export SAS_RAND_SEED=0882341001
# # [INFO] [2024-11-30T23:50:15] ## DEBUG ModuleResources: SAS_RAND_SEED set: 0882341001
# [COMMAND] [2024-11-30T23:50:15]
atthkgen atthkset=product/P0882341001OBX000ATTTSR0000.FIT preqgtifile=intermediate/GlobalHK-all-1-Attitude_GTI-X00000000000000.fits \
timestep=1 withpreqgti=no -w 10
# # [OUTPUT] [2024-11-30T23:50:15]
# # [INFO] [2024-11-30T23:50:15] Task Run Time atthkgen 0.30254602432251s
#
# [COMMAND] [2024-11-30T23:50:15]
export SAS_MEMORY_MODEL=high
# [COMMAND] [2024-11-30T23:50:15]
export SAS_RAND_SEED=0882341001
# # [INFO] [2024-11-30T23:50:15] ## DEBUG ModuleResources: SAS_RAND_SEED set: 0882341001
# [COMMAND] [2024-11-30T23:50:15]
orbit outfile=product/P0882341001OBX000ORBTSR0000.FIT timestep=1 useobsid=yes -w 10
# # [OUTPUT] [2024-11-30T23:50:15] orbit:- Output FITS Orbit timeseries: product/P0882341001OBX000ORBTSR0000.FIT
# orbit:- Binsize (timestep) of output): 1
# orbit:- Use OBSID data or whole orbit? T 
# # [INFO] [2024-11-30T23:50:15] Task Run Time orbit 0.451757192611694s
#
# [COMMAND] [2024-11-30T23:50:15]
export SAS_MEMORY_MODEL=high
# [COMMAND] [2024-11-30T23:50:15]
export SAS_RAND_SEED=0882341001
# # [INFO] [2024-11-30T23:50:15] ## DEBUG ModuleResources: SAS_RAND_SEED set: 0882341001
# [COMMAND] [2024-11-30T23:50:15]
radmonfix output=product/P0882341001OBX000RADMON0000.FIT radmonlist=odf/3957_0882341001_RMX00100ECX.FIT withoutputfile=yes -w 10
# # [OUTPUT] [2024-11-30T23:50:15] ** radmonfix: warning (Extrapolation), Evaluating OBT-MET fit polynomial at x=214221473.9 which\
#     is outside the time correlation data abscissa range [214210360.8, 214221371.3] - result of extrapolation might be afflicted\
#     with large numerical uncertainty.
# ** radmonfix: warning (Extrapolation), Evaluating OBT-MET fit polynomial at x=214221477.9 which is outside the time correlation\
#     data abscissa range [214210360.8, 214221371.3] - result of extrapolation might be afflicted with large numerical uncertainty.
# ** radmonfix: warning (Extrapolation), Evaluating OBT-MET fit polynomial at x=214221481.9 which is outside the time correlation\
#     data abscissa range [214210360.8, 214221371.3] - result of extrapolation might be afflicted with large numerical uncertainty.
# ** radmonfix: warning (Extrapolation), Evaluating OBT-MET fit polynomial at x=214221485.9 which is outside the time correlation\
#     data abscissa range [214210360.8, 214221371.3] - result of extrapolation might be afflicted with large numerical uncertainty.
# ** radmonfix: warning (Extrapolation), Evaluating OBT-MET fit polynomial at x=214221489.9 which is outside the time correlation\
#     data abscissa range [214210360.8, 214221371.3] - result of extrapolation might be afflicted with large numerical uncertainty.
# ** radmonfix: warning (Extrapolation), Evaluating OBT-MET fit polynomial at x=214221493.9 which is outside the time correlation\
#     data abscissa range [214210360.8, 214221371.3] - result of extrapolation might be afflicted with large numerical uncertainty.
# ** radmonfix: warning (Extrapolation), Evaluating OBT-MET fit polynomial at x=214221497.9 which is outside the time correlation\
#     data abscissa range [214210360.8, 214221371.3] - result of extrapolation might be afflicted with large numerical uncertainty.
# ** radmonfix: warning (Extrapolation), Evaluating OBT-MET fit polynomial at x=214221501.9 which is outside the time correlation\
#     data abscissa range [214210360.8, 214221371.3] - result of extrapolation might be afflicted with large numerical uncertainty.
# ** radmonfix: warning (Extrapolation), Evaluating OBT-MET fit polynomial at x=214221505.9 which is outside the time correlation\
#     data abscissa range [214210360.8, 214221371.3] - result of extrapolation might be afflicted with large numerical uncertainty.
# ** radmonfix: warning (Extrapolation), Evaluating OBT-MET fit polynomial at x=214221509.9 which is outside the time correlation\
#     data abscissa range [214210360.8, 214221371.3] - result of extrapolation might be afflicted with large numerical uncertainty.
# radmonfix:- Setting DATE-END...
# ** radmonfix: warning (SummaryOfWarnings), 
# warning Extrapolation silently occurred 270 times 
# # [INFO] [2024-11-30T23:50:15] Task Run Time radmonfix 0.134973049163818s
#
# [COMMAND] [2024-11-30T23:50:15]
cp /lhome/jperea/ppsdev/pcms3/src/pipeline/etc/EPICModes.fits \
/scratch/226291.1.all.q/xmm/ppsprod/229437/intermediate/GlobalHK-all-1-Observing_modes_Pileup_and_OoT_data-X00000000000000.fits
# # [INFO] [2024-11-30T23:50:15] System RV 0
# # [INFO] [2024-11-30T23:50:15] Copied EPIC Observing modes table, Pileup data and OoT data table in place
# [COMMAND] [2024-11-30T23:50:15]
cp /lhome/jperea/ppsdev/pcms3/src/pipeline/etc/ecfs.fits \
/scratch/226291.1.all.q/xmm/ppsprod/229437/intermediate/GlobalHK-all-1-Energy_Conversion_Factors-X00000000000000.fits
# # [INFO] [2024-11-30T23:50:15] System RV 0
# [COMMAND] [2024-11-30T23:50:15]
cp /lhome/jperea/ppsdev/pcms3/src/pipeline/etc/ecfgrid.fits.gz \
/scratch/226291.1.all.q/xmm/ppsprod/229437/intermediate/GlobalHK-all-1-Energy_Conversion_Factors_Grid-X00000000000000.fits
# # [INFO] [2024-11-30T23:50:15] System RV 0
# [COMMAND] [2024-11-30T23:50:15]
cp /lhome/jperea/ppsdev/pcms3/src/pipeline/etc/fluxgrid.fits.gz \
/scratch/226291.1.all.q/xmm/ppsprod/229437/intermediate/GlobalHK-all-1-Flux_Grid-X00000000000000.fits
# # [INFO] [2024-11-30T23:50:15] System RV 0
# # [INFO] [2024-11-30T23:50:15] Module name: ExpChooser
# # [INFO] [2024-11-30T23:50:15] Instrument: emos1
# # [INFO] [2024-11-30T23:50:15] Stream no.: 0001
# # [INFO] [2024-11-30T23:50:16] Module version number: 1.38
# # [INFO] [2024-11-30T23:50:16] Checking exposure S001 for processability
# # [INFO] [2024-11-30T23:50:16] Filter: CalClosed
# # [INFO] [2024-11-30T23:50:16] Instrument mode: PrimeFullWindow
# # [INFO] [2024-11-30T23:50:16] Exposure duration: 9062
# # [INFO] [2024-11-30T23:50:16] Exposure ignored due to invalid or unsupported filter
# # [INFO] [2024-11-30T23:50:16] Module name: ExpChooser
# # [INFO] [2024-11-30T23:50:16] Instrument: emos2
# # [INFO] [2024-11-30T23:50:16] Stream no.: 0001
# # [INFO] [2024-11-30T23:50:16] Module version number: 1.38
# # [INFO] [2024-11-30T23:50:16] Checking exposure S002 for processability
# # [INFO] [2024-11-30T23:50:16] Filter: CalClosed
# # [INFO] [2024-11-30T23:50:16] Instrument mode: PrimeFullWindow
# # [INFO] [2024-11-30T23:50:16] Exposure duration: 9042
# # [INFO] [2024-11-30T23:50:16] Exposure ignored due to invalid or unsupported filter
# # [INFO] [2024-11-30T23:50:16] Module name: ExpChooser
# # [INFO] [2024-11-30T23:50:16] Instrument: epn
# # [INFO] [2024-11-30T23:50:16] Stream no.: 0001
# # [INFO] [2024-11-30T23:50:16] Module version number: 1.38
# # [INFO] [2024-11-30T23:50:16] Checking exposure S003 for processability
# # [INFO] [2024-11-30T23:50:16] Filter: CalClosed
# # [INFO] [2024-11-30T23:50:16] Instrument mode: PrimeFullWindow
# # [INFO] [2024-11-30T23:50:16] Exposure duration: 7192
# # [INFO] [2024-11-30T23:50:16] Exposure ignored due to invalid or unsupported filter
# # [INFO] [2024-11-30T23:50:16] Module name: ExpChooser
# # [INFO] [2024-11-30T23:50:16] Instrument: epn
# # [INFO] [2024-11-30T23:50:16] Stream no.: 0002
# # [INFO] [2024-11-30T23:50:16] Module version number: 1.38
# # [INFO] [2024-11-30T23:50:16] Checking exposure U002 for processability
# # [INFO] [2024-11-30T23:50:16] Exposure ignored due to lack of event files
# # [INFO] [2024-11-30T23:50:16] Module name: ExpChooser
# # [INFO] [2024-11-30T23:50:16] Instrument: epn
# # [INFO] [2024-11-30T23:50:16] Stream no.: 0003
# # [INFO] [2024-11-30T23:50:16] Module version number: 1.38
# # [INFO] [2024-11-30T23:50:16] Checking exposure U003 for processability
# # [INFO] [2024-11-30T23:50:16] Exposure ignored due to lack of event files
# # [INFO] [2024-11-30T23:50:16] Module name: ExpChooser
# # [INFO] [2024-11-30T23:50:16] Instrument: epn
# # [INFO] [2024-11-30T23:50:16] Stream no.: 0004
# # [INFO] [2024-11-30T23:50:16] Module version number: 1.38
# # [INFO] [2024-11-30T23:50:16] Checking exposure U004 for processability
# # [INFO] [2024-11-30T23:50:16] Exposure ignored due to lack of event files
# # [INFO] [2024-11-30T23:50:16] Module name: ExpChooser
# # [INFO] [2024-11-30T23:50:16] Instrument: epn
# # [INFO] [2024-11-30T23:50:16] Stream no.: 0005
# # [INFO] [2024-11-30T23:50:16] Module version number: 1.38
# # [INFO] [2024-11-30T23:50:16] Checking exposure U005 for processability
# # [INFO] [2024-11-30T23:50:16] Exposure ignored due to lack of event files
# # [INFO] [2024-11-30T23:50:16] Module name: ExpChooser
# # [INFO] [2024-11-30T23:50:16] Instrument: epn
# # [INFO] [2024-11-30T23:50:16] Stream no.: 0006
# # [INFO] [2024-11-30T23:50:16] Module version number: 1.38
# # [INFO] [2024-11-30T23:50:16] Checking exposure U006 for processability
# # [INFO] [2024-11-30T23:50:16] Exposure ignored due to lack of event files
# # [INFO] [2024-11-30T23:50:16] Module name: ExpChooser
# # [INFO] [2024-11-30T23:50:16] Instrument: epn
# # [INFO] [2024-11-30T23:50:16] Stream no.: 0007
# # [INFO] [2024-11-30T23:50:16] Module version number: 1.38
# # [INFO] [2024-11-30T23:50:16] Checking exposure U007 for processability
# # [INFO] [2024-11-30T23:50:16] Exposure ignored due to lack of event files
# # [INFO] [2024-11-30T23:50:16] Module name: ExpChooser
# # [INFO] [2024-11-30T23:50:16] Instrument: epn
# # [INFO] [2024-11-30T23:50:16] Stream no.: 0008
# # [INFO] [2024-11-30T23:50:16] Module version number: 1.38
# # [INFO] [2024-11-30T23:50:16] Checking exposure U008 for processability
# # [INFO] [2024-11-30T23:50:16] Exposure ignored due to lack of event files
# # [INFO] [2024-11-30T23:50:16] Module name: ExpChooser
# # [INFO] [2024-11-30T23:50:16] Instrument: epn
# # [INFO] [2024-11-30T23:50:16] Stream no.: 0009
# # [INFO] [2024-11-30T23:50:16] Module version number: 1.38
# # [INFO] [2024-11-30T23:50:16] Checking exposure U009 for processability
# # [INFO] [2024-11-30T23:50:16] Exposure ignored due to lack of event files
# # [INFO] [2024-11-30T23:50:16] Module name: ExpChooser
# # [INFO] [2024-11-30T23:50:16] Instrument: epn
# # [INFO] [2024-11-30T23:50:16] Stream no.: 0010
# # [INFO] [2024-11-30T23:50:16] Module version number: 1.38
# # [INFO] [2024-11-30T23:50:16] Checking exposure U010 for processability
# # [INFO] [2024-11-30T23:50:16] Exposure ignored due to lack of event files
# # [INFO] [2024-11-30T23:50:16] Module name: ExpChooser
# # [INFO] [2024-11-30T23:50:16] Instrument: epn
# # [INFO] [2024-11-30T23:50:16] Stream no.: 0011
# # [INFO] [2024-11-30T23:50:16] Module version number: 1.38
# # [INFO] [2024-11-30T23:50:16] Checking exposure U011 for processability
# # [INFO] [2024-11-30T23:50:16] Exposure ignored due to lack of event files
# # [INFO] [2024-11-30T23:50:16] Module name: ExpChooser
# # [INFO] [2024-11-30T23:50:16] Instrument: epn
# # [INFO] [2024-11-30T23:50:16] Stream no.: 0012
# # [INFO] [2024-11-30T23:50:16] Module version number: 1.38
# # [INFO] [2024-11-30T23:50:16] Checking exposure U012 for processability
# # [INFO] [2024-11-30T23:50:16] Exposure ignored due to lack of event files
# # [INFO] [2024-11-30T23:50:16] Module name: ExpChooser
# # [INFO] [2024-11-30T23:50:16] Instrument: epn
# # [INFO] [2024-11-30T23:50:16] Stream no.: 0013
# # [INFO] [2024-11-30T23:50:16] Module version number: 1.38
# # [INFO] [2024-11-30T23:50:16] Checking exposure U013 for processability
# # [INFO] [2024-11-30T23:50:16] Exposure ignored due to lack of event files
# # [INFO] [2024-11-30T23:50:16] Module name: ExpChooser
# # [INFO] [2024-11-30T23:50:16] Instrument: epn
# # [INFO] [2024-11-30T23:50:16] Stream no.: 0014
# # [INFO] [2024-11-30T23:50:16] Module version number: 1.38
# # [INFO] [2024-11-30T23:50:16] Checking exposure U700 for processability
# # [INFO] [2024-11-30T23:50:16] Exposure ignored due to lack of event files
