
#!/bin/sh
if [ ! "$SAS_ODFDIR" ]; then
echo ""
echo "Please set the SAS_ODFDIR environment variable to point at the directory"
echo "containing the ODF files for this observation."
echo ""
exit 1
fi
# # [INFO] [2024-11-30T23:43:44] Module name: VerifyODF
# # [INFO] [2024-11-30T23:43:44] Instrument: all
# # [INFO] [2024-11-30T23:43:44] Stream no.: 0001
# # [INFO] [2024-11-30T23:43:44] Module version number: 1.18
# # [INFO] [2024-11-30T23:43:44] Version of odfingest used was 3.33.1
# # [INFO] [2024-11-30T23:43:44] Module name: MakeCIF
# # [INFO] [2024-11-30T23:43:44] Instrument: all
# # [INFO] [2024-11-30T23:43:44] Stream no.: 0001
# # [INFO] [2024-11-30T23:43:44] Module version number: 1.23
# # [INFO] [2024-11-30T23:43:44] Observation start defined as >2022-09-19T10:44:26.000<
# # [INFO] [2024-11-30T23:43:44] Processing date defined as >2024-12-01T00:43:44<
# [COMMAND] [2024-11-30T23:43:44]
export SAS_MEMORY_MODEL=high
# [COMMAND] [2024-11-30T23:43:44]
export SAS_RAND_SEED=0903840201
# # [INFO] [2024-11-30T23:43:44] ## DEBUG ModuleResources: SAS_RAND_SEED set: 0903840201
# [COMMAND] [2024-11-30T23:43:44]
cifbuild analysisdate=2024-12-01T00:43:44 calindexset=product/P0903840201OBX000CALIND0000.FIT fullpath=no \
observationdate=2022-09-19T10:44:26.000 withccfpath=no -w 10
# # [OUTPUT] [2024-11-30T23:44:13]
# # [INFO] [2024-11-30T23:44:13] Task Run Time cifbuild 28.3987398147583s
#
# [COMMAND] [2024-11-30T23:44:13]
export SAS_MEMORY_MODEL=high
# [COMMAND] [2024-11-30T23:44:13]
export SAS_RAND_SEED=0903840201
# # [INFO] [2024-11-30T23:44:13] ## DEBUG ModuleResources: SAS_RAND_SEED set: 0903840201
# [COMMAND] [2024-11-30T23:44:13]
addattribute attributecomment="\"Telescope (mission) name\" \"DEC of instrument pointing\" \"RA of instrument pointing (degrees)\" \
\"Name of observed object\" \"Observation mode (pointing or slew)\" \"Date observations ended\" \"Observation identifier\" \"Name of \
PI\" \"Date observations were made\"" attributename="TELESCOP DEC_PNT RA_PNT OBJECT OBS_MODE DATE-END OBS_ID OBSERVER DATE-OBS" \
attributetype="string real real string string string string string string" realvalue="-61.7112600 256.567875" \
set=product/P0903840201OBX000CALIND0000.FIT stringvalue="\"XMM\" \"IGR J17062-6143\" \"POINTED\" \"2022-09-19T13:36:07.000\" \
\"0903840201\" \"Dr Nathalie Degenaar\" \"2022-09-19T10:44:26.000\"" -w 10
# # [OUTPUT] [2024-11-30T23:44:13]
# # [INFO] [2024-11-30T23:44:13] Task Run Time addattribute 0.0429129600524902s
#
# [COMMAND] [2024-11-30T23:44:13]
cp /scratch/225822.1.all.q/xmm/ppsprod/228967/product/P0903840201OBX000CALIND0000.FIT \
/scratch/225822.1.all.q/xmm/ppsprod/228967/intermediate/ccf.cif
# # [INFO] [2024-11-30T23:44:13] System RV 0
# # [INFO] [2024-11-30T23:44:13] Module name: GlobalHK
# # [INFO] [2024-11-30T23:44:13] Instrument: all
# # [INFO] [2024-11-30T23:44:13] Stream no.: 0001
# # [INFO] [2024-11-30T23:44:13] Module version number: 1.81
# [COMMAND] [2024-11-30T23:44:13]
export SAS_MEMORY_MODEL=high
# [COMMAND] [2024-11-30T23:44:13]
export SAS_RAND_SEED=0903840201
# # [INFO] [2024-11-30T23:44:13] ## DEBUG ModuleResources: SAS_RAND_SEED set: 0903840201
# [COMMAND] [2024-11-30T23:44:13]
preqgti preqgtifile=intermediate/GlobalHK-all-1-Attitude_GTI-X00000000000000.fits -w 10
# # [OUTPUT] [2024-11-30T23:44:17] ** preqgti::atthkgen: warning (NoAttitude), The attitude was requested for time 779987374.184\
#     which is more than 20 s outside the period for which the attitude is known (closest time is 20.0000001192 s away).
# ** preqgti::atthkgen: warning (NoAttitude), The attitude was requested for time 779987374.184 which is more than 20 s outside the\
#     period for which the attitude is known (closest time is 20.0000001192 s away).
# ** preqgti::atthkgen: warning (NoAttitude), The attitude was requested for time 779987375.184 which is more than 20 s outside the\
#     period for which the attitude is known (closest time is 20.0000001192 s away).
# ** preqgti::atthkgen: warning (NoAttitude), The attitude was requested for time 779987375.184 which is more than 20 s outside the\
#     period for which the attitude is known (closest time is 20.0000001192 s away).
# ** preqgti::atthkgen: warning (NoAttitude), The attitude was requested for time 779987376.184 which is more than 20 s outside the\
#     period for which the attitude is known (closest time is 20.0000001192 s away).
# ** preqgti::atthkgen: warning (NoAttitude), The attitude was requested for time 779987376.184 which is more than 20 s outside the\
#     period for which the attitude is known (closest time is 20.0000001192 s away).
# ** preqgti::atthkgen: warning (NoAttitude), The attitude was requested for time 779987377.184 which is more than 20 s outside the\
#     period for which the attitude is known (closest time is 20.0000001192 s away).
# ** preqgti::atthkgen: warning (NoAttitude), The attitude was requested for time 779987377.184 which is more than 20 s outside the\
#     period for which the attitude is known (closest time is 20.0000001192 s away).
# ** preqgti::atthkgen: warning (NoAttitude), The attitude was requested for time 779987378.184 which is more than 20 s outside the\
#     period for which the attitude is known (closest time is 21.0000001192 s away).
# ** preqgti::atthkgen: warning (NoAttitude), The attitude was requested for time 779987378.184 which is more than 20 s outside the\
#     period for which the attitude is known (closest time is 21.0000001192 s away).
# ** preqgti: warning (SummaryOfWarnings), 
# warning NoAttitude silently occurred 240040 times 
# # [INFO] [2024-11-30T23:44:17] Task Run Time preqgti 4.75775098800659s
#
# [COMMAND] [2024-11-30T23:44:17]
export SAS_MEMORY_MODEL=high
# [COMMAND] [2024-11-30T23:44:17]
export SAS_RAND_SEED=0903840201
# # [INFO] [2024-11-30T23:44:17] ## DEBUG ModuleResources: SAS_RAND_SEED set: 0903840201
# [COMMAND] [2024-11-30T23:44:17]
atthkgen atthkset=product/P0903840201OBX000ATTTSR0000.FIT preqgtifile=intermediate/GlobalHK-all-1-Attitude_GTI-X00000000000000.fits \
timestep=1 withpreqgti=no -w 10
# # [OUTPUT] [2024-11-30T23:44:18]
# # [INFO] [2024-11-30T23:44:18] Task Run Time atthkgen 0.255357980728149s
#
# [COMMAND] [2024-11-30T23:44:18]
export SAS_MEMORY_MODEL=high
# [COMMAND] [2024-11-30T23:44:18]
export SAS_RAND_SEED=0903840201
# # [INFO] [2024-11-30T23:44:18] ## DEBUG ModuleResources: SAS_RAND_SEED set: 0903840201
# [COMMAND] [2024-11-30T23:44:18]
orbit outfile=product/P0903840201OBX000ORBTSR0000.FIT timestep=1 useobsid=yes -w 10
# # [OUTPUT] [2024-11-30T23:44:18] orbit:- Output FITS Orbit timeseries: product/P0903840201OBX000ORBTSR0000.FIT
# orbit:- Binsize (timestep) of output): 1
# orbit:- Use OBSID data or whole orbit? T 
# # [INFO] [2024-11-30T23:44:18] Task Run Time orbit 0.369601011276245s
#
# [COMMAND] [2024-11-30T23:44:18]
export SAS_MEMORY_MODEL=high
# [COMMAND] [2024-11-30T23:44:18]
export SAS_RAND_SEED=0903840201
# # [INFO] [2024-11-30T23:44:18] ## DEBUG ModuleResources: SAS_RAND_SEED set: 0903840201
# [COMMAND] [2024-11-30T23:44:18]
radmonfix output=product/P0903840201OBX000RADMON0000.FIT radmonlist=odf/4172_0903840201_RMX00100ECX.FIT withoutputfile=yes -w 10
# # [OUTPUT] [2024-11-30T23:44:18] ** radmonfix: warning (Extrapolation), Evaluating OBT-MET fit polynomial at x=1688073.945 which\
#     is outside the time correlation data abscissa range [1675926.602, 1687969.985] - result of extrapolation might be afflicted\
#     with large numerical uncertainty.
# ** radmonfix: warning (Extrapolation), Evaluating OBT-MET fit polynomial at x=1688077.945 which is outside the time correlation\
#     data abscissa range [1675926.602, 1687969.985] - result of extrapolation might be afflicted with large numerical uncertainty.
# ** radmonfix: warning (Extrapolation), Evaluating OBT-MET fit polynomial at x=1688081.945 which is outside the time correlation\
#     data abscissa range [1675926.602, 1687969.985] - result of extrapolation might be afflicted with large numerical uncertainty.
# ** radmonfix: warning (Extrapolation), Evaluating OBT-MET fit polynomial at x=1688085.945 which is outside the time correlation\
#     data abscissa range [1675926.602, 1687969.985] - result of extrapolation might be afflicted with large numerical uncertainty.
# ** radmonfix: warning (Extrapolation), Evaluating OBT-MET fit polynomial at x=1688089.945 which is outside the time correlation\
#     data abscissa range [1675926.602, 1687969.985] - result of extrapolation might be afflicted with large numerical uncertainty.
# ** radmonfix: warning (Extrapolation), Evaluating OBT-MET fit polynomial at x=1688093.945 which is outside the time correlation\
#     data abscissa range [1675926.602, 1687969.985] - result of extrapolation might be afflicted with large numerical uncertainty.
# ** radmonfix: warning (Extrapolation), Evaluating OBT-MET fit polynomial at x=1688097.945 which is outside the time correlation\
#     data abscissa range [1675926.602, 1687969.985] - result of extrapolation might be afflicted with large numerical uncertainty.
# ** radmonfix: warning (Extrapolation), Evaluating OBT-MET fit polynomial at x=1688101.945 which is outside the time correlation\
#     data abscissa range [1675926.602, 1687969.985] - result of extrapolation might be afflicted with large numerical uncertainty.
# ** radmonfix: warning (Extrapolation), Evaluating OBT-MET fit polynomial at x=1688105.945 which is outside the time correlation\
#     data abscissa range [1675926.602, 1687969.985] - result of extrapolation might be afflicted with large numerical uncertainty.
# ** radmonfix: warning (Extrapolation), Evaluating OBT-MET fit polynomial at x=1688109.945 which is outside the time correlation\
#     data abscissa range [1675926.602, 1687969.985] - result of extrapolation might be afflicted with large numerical uncertainty.
# radmonfix:- Setting DATE-END...
# ** radmonfix: warning (SummaryOfWarnings), 
# warning Extrapolation silently occurred 394 times 
# # [INFO] [2024-11-30T23:44:18] Task Run Time radmonfix 0.0931289196014404s
#
# [COMMAND] [2024-11-30T23:44:18]
cp /lhome/jperea/ppsdev/pcms3/src/pipeline/etc/EPICModes.fits \
/scratch/225822.1.all.q/xmm/ppsprod/228967/intermediate/GlobalHK-all-1-Observing_modes_Pileup_and_OoT_data-X00000000000000.fits
# # [INFO] [2024-11-30T23:44:18] System RV 0
# # [INFO] [2024-11-30T23:44:18] Copied EPIC Observing modes table, Pileup data and OoT data table in place
# [COMMAND] [2024-11-30T23:44:18]
cp /lhome/jperea/ppsdev/pcms3/src/pipeline/etc/ecfs.fits \
/scratch/225822.1.all.q/xmm/ppsprod/228967/intermediate/GlobalHK-all-1-Energy_Conversion_Factors-X00000000000000.fits
# # [INFO] [2024-11-30T23:44:18] System RV 0
# [COMMAND] [2024-11-30T23:44:18]
cp /lhome/jperea/ppsdev/pcms3/src/pipeline/etc/ecfgrid.fits.gz \
/scratch/225822.1.all.q/xmm/ppsprod/228967/intermediate/GlobalHK-all-1-Energy_Conversion_Factors_Grid-X00000000000000.fits
# # [INFO] [2024-11-30T23:44:18] System RV 0
# [COMMAND] [2024-11-30T23:44:18]
cp /lhome/jperea/ppsdev/pcms3/src/pipeline/etc/fluxgrid.fits.gz \
/scratch/225822.1.all.q/xmm/ppsprod/228967/intermediate/GlobalHK-all-1-Flux_Grid-X00000000000000.fits
# # [INFO] [2024-11-30T23:44:18] System RV 0
# # [INFO] [2024-11-30T23:44:18] Module name: ExpChooser
# # [INFO] [2024-11-30T23:44:18] Instrument: emos1
# # [INFO] [2024-11-30T23:44:18] Stream no.: 0001
# # [INFO] [2024-11-30T23:44:18] Module version number: 1.38
# # [INFO] [2024-11-30T23:44:18] Checking exposure S001 for processability
# # [INFO] [2024-11-30T23:44:18] Filter: CalClosed
# # [INFO] [2024-11-30T23:44:18] Instrument mode: PrimeFullWindow
# # [INFO] [2024-11-30T23:44:18] Exposure duration: 10095
# # [INFO] [2024-11-30T23:44:18] Exposure ignored due to invalid or unsupported filter
# # [INFO] [2024-11-30T23:44:18] Module name: ExpChooser
# # [INFO] [2024-11-30T23:44:18] Instrument: emos2
# # [INFO] [2024-11-30T23:44:18] Stream no.: 0001
# # [INFO] [2024-11-30T23:44:18] Module version number: 1.38
# # [INFO] [2024-11-30T23:44:18] Checking exposure S002 for processability
# # [INFO] [2024-11-30T23:44:18] Filter: CalClosed
# # [INFO] [2024-11-30T23:44:18] Instrument mode: PrimeFullWindow
# # [INFO] [2024-11-30T23:44:18] Exposure duration: 10080
# # [INFO] [2024-11-30T23:44:18] Exposure ignored due to invalid or unsupported filter
# # [INFO] [2024-11-30T23:44:18] Module name: ExpChooser
# # [INFO] [2024-11-30T23:44:18] Instrument: epn
# # [INFO] [2024-11-30T23:44:18] Stream no.: 0001
# # [INFO] [2024-11-30T23:44:18] Module version number: 1.38
# # [INFO] [2024-11-30T23:44:18] Checking exposure S003 for processability
# # [INFO] [2024-11-30T23:44:18] Filter: CalClosed
# # [INFO] [2024-11-30T23:44:18] Instrument mode: PrimeFullWindow
# # [INFO] [2024-11-30T23:44:18] Exposure duration: 8233
# # [INFO] [2024-11-30T23:44:18] Exposure ignored due to invalid or unsupported filter
# # [INFO] [2024-11-30T23:44:18] Module name: ExpChooser
# # [INFO] [2024-11-30T23:44:18] Instrument: epn
# # [INFO] [2024-11-30T23:44:18] Stream no.: 0002
# # [INFO] [2024-11-30T23:44:18] Module version number: 1.38
# # [INFO] [2024-11-30T23:44:18] Checking exposure U002 for processability
# # [INFO] [2024-11-30T23:44:18] Exposure ignored due to lack of event files
# # [INFO] [2024-11-30T23:44:18] Module name: ExpChooser
# # [INFO] [2024-11-30T23:44:18] Instrument: epn
# # [INFO] [2024-11-30T23:44:18] Stream no.: 0003
# # [INFO] [2024-11-30T23:44:18] Module version number: 1.38
# # [INFO] [2024-11-30T23:44:18] Checking exposure U003 for processability
# # [INFO] [2024-11-30T23:44:18] Exposure ignored due to lack of event files
# # [INFO] [2024-11-30T23:44:18] Module name: ExpChooser
# # [INFO] [2024-11-30T23:44:18] Instrument: epn
# # [INFO] [2024-11-30T23:44:18] Stream no.: 0004
# # [INFO] [2024-11-30T23:44:18] Module version number: 1.38
# # [INFO] [2024-11-30T23:44:18] Checking exposure U004 for processability
# # [INFO] [2024-11-30T23:44:18] Exposure ignored due to lack of event files
# # [INFO] [2024-11-30T23:44:18] Module name: ExpChooser
# # [INFO] [2024-11-30T23:44:18] Instrument: epn
# # [INFO] [2024-11-30T23:44:18] Stream no.: 0005
# # [INFO] [2024-11-30T23:44:18] Module version number: 1.38
# # [INFO] [2024-11-30T23:44:18] Checking exposure U005 for processability
# # [INFO] [2024-11-30T23:44:18] Exposure ignored due to lack of event files
# # [INFO] [2024-11-30T23:44:18] Module name: ExpChooser
# # [INFO] [2024-11-30T23:44:18] Instrument: epn
# # [INFO] [2024-11-30T23:44:18] Stream no.: 0006
# # [INFO] [2024-11-30T23:44:18] Module version number: 1.38
# # [INFO] [2024-11-30T23:44:18] Checking exposure U006 for processability
# # [INFO] [2024-11-30T23:44:18] Exposure ignored due to lack of event files
# # [INFO] [2024-11-30T23:44:18] Module name: ExpChooser
# # [INFO] [2024-11-30T23:44:18] Instrument: epn
# # [INFO] [2024-11-30T23:44:18] Stream no.: 0007
# # [INFO] [2024-11-30T23:44:18] Module version number: 1.38
# # [INFO] [2024-11-30T23:44:18] Checking exposure U007 for processability
# # [INFO] [2024-11-30T23:44:18] Exposure ignored due to lack of event files
# # [INFO] [2024-11-30T23:44:18] Module name: ExpChooser
# # [INFO] [2024-11-30T23:44:18] Instrument: epn
# # [INFO] [2024-11-30T23:44:18] Stream no.: 0008
# # [INFO] [2024-11-30T23:44:18] Module version number: 1.38
# # [INFO] [2024-11-30T23:44:18] Checking exposure U008 for processability
# # [INFO] [2024-11-30T23:44:18] Exposure ignored due to lack of event files
# # [INFO] [2024-11-30T23:44:18] Module name: ExpChooser
# # [INFO] [2024-11-30T23:44:18] Instrument: epn
# # [INFO] [2024-11-30T23:44:18] Stream no.: 0009
# # [INFO] [2024-11-30T23:44:18] Module version number: 1.38
# # [INFO] [2024-11-30T23:44:18] Checking exposure U009 for processability
# # [INFO] [2024-11-30T23:44:18] Exposure ignored due to lack of event files
# # [INFO] [2024-11-30T23:44:18] Module name: ExpChooser
# # [INFO] [2024-11-30T23:44:18] Instrument: epn
# # [INFO] [2024-11-30T23:44:18] Stream no.: 0010
# # [INFO] [2024-11-30T23:44:18] Module version number: 1.38
# # [INFO] [2024-11-30T23:44:18] Checking exposure U010 for processability
# # [INFO] [2024-11-30T23:44:18] Exposure ignored due to lack of event files
# # [INFO] [2024-11-30T23:44:18] Module name: ExpChooser
# # [INFO] [2024-11-30T23:44:18] Instrument: epn
# # [INFO] [2024-11-30T23:44:18] Stream no.: 0011
# # [INFO] [2024-11-30T23:44:18] Module version number: 1.38
# # [INFO] [2024-11-30T23:44:18] Checking exposure U011 for processability
# # [INFO] [2024-11-30T23:44:18] Exposure ignored due to lack of event files
# # [INFO] [2024-11-30T23:44:18] Module name: ExpChooser
# # [INFO] [2024-11-30T23:44:18] Instrument: epn
# # [INFO] [2024-11-30T23:44:18] Stream no.: 0012
# # [INFO] [2024-11-30T23:44:18] Module version number: 1.38
# # [INFO] [2024-11-30T23:44:18] Checking exposure U012 for processability
# # [INFO] [2024-11-30T23:44:18] Exposure ignored due to lack of event files
# # [INFO] [2024-11-30T23:44:18] Module name: ExpChooser
# # [INFO] [2024-11-30T23:44:18] Instrument: epn
# # [INFO] [2024-11-30T23:44:18] Stream no.: 0013
# # [INFO] [2024-11-30T23:44:18] Module version number: 1.38
# # [INFO] [2024-11-30T23:44:18] Checking exposure U013 for processability
# # [INFO] [2024-11-30T23:44:18] Exposure ignored due to lack of event files
# # [INFO] [2024-11-30T23:44:18] Module name: ExpChooser
# # [INFO] [2024-11-30T23:44:18] Instrument: epn
# # [INFO] [2024-11-30T23:44:18] Stream no.: 0014
# # [INFO] [2024-11-30T23:44:18] Module version number: 1.38
# # [INFO] [2024-11-30T23:44:18] Checking exposure U700 for processability
# # [INFO] [2024-11-30T23:44:18] Exposure ignored due to lack of event files
