
#!/bin/sh
if [ ! "$SAS_ODFDIR" ]; then
echo ""
echo "Please set the SAS_ODFDIR environment variable to point at the directory"
echo "containing the ODF files for this observation."
echo ""
exit 1
fi
# # [INFO] [2024-11-30T23:57:54] Module name: VerifyODF
# # [INFO] [2024-11-30T23:57:54] Instrument: all
# # [INFO] [2024-11-30T23:57:54] Stream no.: 0001
# # [INFO] [2024-11-30T23:57:54] Module version number: 1.18
# # [INFO] [2024-11-30T23:57:54] Version of odfingest used was 3.33.1
# # [INFO] [2024-11-30T23:57:54] Module name: MakeCIF
# # [INFO] [2024-11-30T23:57:54] Instrument: all
# # [INFO] [2024-11-30T23:57:54] Stream no.: 0001
# # [INFO] [2024-11-30T23:57:54] Module version number: 1.23
# # [INFO] [2024-11-30T23:57:54] Observation start defined as >2023-05-28T18:07:05.000<
# # [INFO] [2024-11-30T23:57:54] Processing date defined as >2024-12-01T00:57:54<
# [COMMAND] [2024-11-30T23:57:54]
export SAS_MEMORY_MODEL=high
# [COMMAND] [2024-11-30T23:57:54]
export SAS_RAND_SEED=0923310801
# # [INFO] [2024-11-30T23:57:54] ## DEBUG ModuleResources: SAS_RAND_SEED set: 0923310801
# [COMMAND] [2024-11-30T23:57:54]
cifbuild analysisdate=2024-12-01T00:57:54 calindexset=product/P0923310801OBX000CALIND0000.FIT fullpath=no \
observationdate=2023-05-28T18:07:05.000 withccfpath=no -w 10
# # [OUTPUT] [2024-11-30T23:58:21]
# # [INFO] [2024-11-30T23:58:21] Task Run Time cifbuild 27.2139811515808s
#
# [COMMAND] [2024-11-30T23:58:21]
export SAS_MEMORY_MODEL=high
# [COMMAND] [2024-11-30T23:58:21]
export SAS_RAND_SEED=0923310801
# # [INFO] [2024-11-30T23:58:21] ## DEBUG ModuleResources: SAS_RAND_SEED set: 0923310801
# [COMMAND] [2024-11-30T23:58:21]
addattribute attributecomment="\"Telescope (mission) name\" \"Name of PI\" \"Date observations ended\" \"RA of instrument pointing \
(degrees)\" \"DEC of instrument pointing\" \"Date observations were made\" \"Observation identifier\" \"Name of observed object\" \
\"Observation mode (pointing or slew)\"" attributename="TELESCOP OBSERVER DATE-END RA_PNT DEC_PNT DATE-OBS OBS_ID OBJECT OBS_MODE" \
attributetype="string string string real real string string string string" realvalue="\"166.6977465\" \"72.5686939\"" \
set=product/P0923310801OBX000CALIND0000.FIT stringvalue="\"XMM\" \"Dr Missagh Mehdipour\" \"2023-05-28T21:27:10.000\" \
\"2023-05-28T18:07:05.000\" \"0923310801\" \"NGC 3516\" \"POINTED\"" -w 10
# # [OUTPUT] [2024-11-30T23:58:21]
# # [INFO] [2024-11-30T23:58:21] Task Run Time addattribute 0.0346348285675049s
#
# [COMMAND] [2024-11-30T23:58:21]
cp /scratch/226999.1.all.q/xmm/ppsprod/230144/product/P0923310801OBX000CALIND0000.FIT \
/scratch/226999.1.all.q/xmm/ppsprod/230144/intermediate/ccf.cif
# # [INFO] [2024-11-30T23:58:21] System RV 0
# # [INFO] [2024-11-30T23:58:21] Module name: GlobalHK
# # [INFO] [2024-11-30T23:58:21] Instrument: all
# # [INFO] [2024-11-30T23:58:21] Stream no.: 0001
# # [INFO] [2024-11-30T23:58:21] Module version number: 1.81
# [COMMAND] [2024-11-30T23:58:21]
export SAS_MEMORY_MODEL=high
# [COMMAND] [2024-11-30T23:58:21]
export SAS_RAND_SEED=0923310801
# # [INFO] [2024-11-30T23:58:21] ## DEBUG ModuleResources: SAS_RAND_SEED set: 0923310801
# [COMMAND] [2024-11-30T23:58:21]
preqgti preqgtifile=intermediate/GlobalHK-all-1-Attitude_GTI-X00000000000000.fits -w 10
# # [OUTPUT] [2024-11-30T23:58:22] ** preqgti::atthkgen: warning (NoAttitude), The attitude was requested for time 801698446.184\
#     which is more than 20 s outside the period for which the attitude is known (closest time is 20.0000001192 s away).
# ** preqgti::atthkgen: warning (NoAttitude), The attitude was requested for time 801698446.184 which is more than 20 s outside the\
#     period for which the attitude is known (closest time is 20.0000001192 s away).
# ** preqgti::atthkgen: warning (NoAttitude), The attitude was requested for time 801698447.184 which is more than 20 s outside the\
#     period for which the attitude is known (closest time is 20.0000001192 s away).
# ** preqgti::atthkgen: warning (NoAttitude), The attitude was requested for time 801698447.184 which is more than 20 s outside the\
#     period for which the attitude is known (closest time is 20.0000001192 s away).
# ** preqgti::atthkgen: warning (NoAttitude), The attitude was requested for time 801698448.184 which is more than 20 s outside the\
#     period for which the attitude is known (closest time is 20.0000001192 s away).
# ** preqgti::atthkgen: warning (NoAttitude), The attitude was requested for time 801698448.184 which is more than 20 s outside the\
#     period for which the attitude is known (closest time is 20.0000001192 s away).
# ** preqgti::atthkgen: warning (NoAttitude), The attitude was requested for time 801698449.184 which is more than 20 s outside the\
#     period for which the attitude is known (closest time is 20.0000001192 s away).
# ** preqgti::atthkgen: warning (NoAttitude), The attitude was requested for time 801698449.184 which is more than 20 s outside the\
#     period for which the attitude is known (closest time is 20.0000001192 s away).
# ** preqgti::atthkgen: warning (NoAttitude), The attitude was requested for time 801698450.184 which is more than 20 s outside the\
#     period for which the attitude is known (closest time is 21.0000001192 s away).
# ** preqgti::atthkgen: warning (NoAttitude), The attitude was requested for time 801698450.184 which is more than 20 s outside the\
#     period for which the attitude is known (closest time is 21.0000001192 s away).
# ** preqgti: warning (SummaryOfWarnings), 
# warning NoAttitude silently occurred 66818 times 
# # [INFO] [2024-11-30T23:58:22] Task Run Time preqgti 1.345055103302s
#
# [COMMAND] [2024-11-30T23:58:22]
export SAS_MEMORY_MODEL=high
# [COMMAND] [2024-11-30T23:58:22]
export SAS_RAND_SEED=0923310801
# # [INFO] [2024-11-30T23:58:22] ## DEBUG ModuleResources: SAS_RAND_SEED set: 0923310801
# [COMMAND] [2024-11-30T23:58:22]
atthkgen atthkset=product/P0923310801OBX000ATTTSR0000.FIT preqgtifile=intermediate/GlobalHK-all-1-Attitude_GTI-X00000000000000.fits \
timestep=1 withpreqgti=no -w 10
# # [OUTPUT] [2024-11-30T23:58:23]
# # [INFO] [2024-11-30T23:58:23] Task Run Time atthkgen 0.285768032073975s
#
# [COMMAND] [2024-11-30T23:58:23]
export SAS_MEMORY_MODEL=high
# [COMMAND] [2024-11-30T23:58:23]
export SAS_RAND_SEED=0923310801
# # [INFO] [2024-11-30T23:58:23] ## DEBUG ModuleResources: SAS_RAND_SEED set: 0923310801
# [COMMAND] [2024-11-30T23:58:23]
orbit outfile=product/P0923310801OBX000ORBTSR0000.FIT timestep=1 useobsid=yes -w 10
# # [OUTPUT] [2024-11-30T23:58:23] orbit:- Output FITS Orbit timeseries: product/P0923310801OBX000ORBTSR0000.FIT
# orbit:- Binsize (timestep) of output): 1
# orbit:- Use OBSID data or whole orbit? T 
# # [INFO] [2024-11-30T23:58:23] Task Run Time orbit 0.392127990722656s
#
# [COMMAND] [2024-11-30T23:58:23]
export SAS_MEMORY_MODEL=high
# [COMMAND] [2024-11-30T23:58:23]
export SAS_RAND_SEED=0923310801
# # [INFO] [2024-11-30T23:58:23] ## DEBUG ModuleResources: SAS_RAND_SEED set: 0923310801
# [COMMAND] [2024-11-30T23:58:23]
radmonfix output=product/P0923310801OBX000RADMON0000.FIT radmonlist="odf/4298_0923310801_RMX00100ECX.FIT \
odf/4298_0923310801_RMX00200ECX.FIT" withoutputfile=yes -w 10
# # [OUTPUT] [2024-11-30T23:58:23] ** radmonfix: warning (Extrapolation), Evaluating OBT-MET fit polynomial at x=23384469.86 which\
#     is outside the time correlation data abscissa range [23385926.2, 23402367.74] - result of extrapolation might be afflicted\
#     with large numerical uncertainty.
# ** radmonfix: warning (Extrapolation), Evaluating OBT-MET fit polynomial at x=23384473.86 which is outside the time correlation\
#     data abscissa range [23385926.2, 23402367.74] - result of extrapolation might be afflicted with large numerical uncertainty.
# ** radmonfix: warning (Extrapolation), Evaluating OBT-MET fit polynomial at x=23384477.86 which is outside the time correlation\
#     data abscissa range [23385926.2, 23402367.74] - result of extrapolation might be afflicted with large numerical uncertainty.
# ** radmonfix: warning (Extrapolation), Evaluating OBT-MET fit polynomial at x=23384481.86 which is outside the time correlation\
#     data abscissa range [23385926.2, 23402367.74] - result of extrapolation might be afflicted with large numerical uncertainty.
# ** radmonfix: warning (Extrapolation), Evaluating OBT-MET fit polynomial at x=23384485.86 which is outside the time correlation\
#     data abscissa range [23385926.2, 23402367.74] - result of extrapolation might be afflicted with large numerical uncertainty.
# ** radmonfix: warning (Extrapolation), Evaluating OBT-MET fit polynomial at x=23384489.86 which is outside the time correlation\
#     data abscissa range [23385926.2, 23402367.74] - result of extrapolation might be afflicted with large numerical uncertainty.
# ** radmonfix: warning (Extrapolation), Evaluating OBT-MET fit polynomial at x=23384493.86 which is outside the time correlation\
#     data abscissa range [23385926.2, 23402367.74] - result of extrapolation might be afflicted with large numerical uncertainty.
# ** radmonfix: warning (Extrapolation), Evaluating OBT-MET fit polynomial at x=23384497.86 which is outside the time correlation\
#     data abscissa range [23385926.2, 23402367.74] - result of extrapolation might be afflicted with large numerical uncertainty.
# ** radmonfix: warning (Extrapolation), Evaluating OBT-MET fit polynomial at x=23384501.86 which is outside the time correlation\
#     data abscissa range [23385926.2, 23402367.74] - result of extrapolation might be afflicted with large numerical uncertainty.
# ** radmonfix: warning (Extrapolation), Evaluating OBT-MET fit polynomial at x=23384505.86 which is outside the time correlation\
#     data abscissa range [23385926.2, 23402367.74] - result of extrapolation might be afflicted with large numerical uncertainty.
# radmonfix:- Adding 3411 counts rows from row 1022
# radmonfix:- Setting DATE-END...
# ** radmonfix: warning (SummaryOfWarnings), 
# warning Extrapolation silently occurred 330 times 
# # [INFO] [2024-11-30T23:58:23] Task Run Time radmonfix 0.0936830043792725s
#
# [COMMAND] [2024-11-30T23:58:23]
cp /lhome/jperea/ppsdev/pcms3/src/pipeline/etc/EPICModes.fits \
/scratch/226999.1.all.q/xmm/ppsprod/230144/intermediate/GlobalHK-all-1-Observing_modes_Pileup_and_OoT_data-X00000000000000.fits
# # [INFO] [2024-11-30T23:58:23] System RV 0
# # [INFO] [2024-11-30T23:58:23] Copied EPIC Observing modes table, Pileup data and OoT data table in place
# [COMMAND] [2024-11-30T23:58:23]
cp /lhome/jperea/ppsdev/pcms3/src/pipeline/etc/ecfs.fits \
/scratch/226999.1.all.q/xmm/ppsprod/230144/intermediate/GlobalHK-all-1-Energy_Conversion_Factors-X00000000000000.fits
# # [INFO] [2024-11-30T23:58:23] System RV 0
# [COMMAND] [2024-11-30T23:58:23]
cp /lhome/jperea/ppsdev/pcms3/src/pipeline/etc/ecfgrid.fits.gz \
/scratch/226999.1.all.q/xmm/ppsprod/230144/intermediate/GlobalHK-all-1-Energy_Conversion_Factors_Grid-X00000000000000.fits
# # [INFO] [2024-11-30T23:58:23] System RV 0
# [COMMAND] [2024-11-30T23:58:23]
cp /lhome/jperea/ppsdev/pcms3/src/pipeline/etc/fluxgrid.fits.gz \
/scratch/226999.1.all.q/xmm/ppsprod/230144/intermediate/GlobalHK-all-1-Flux_Grid-X00000000000000.fits
# # [INFO] [2024-11-30T23:58:23] System RV 0
# # [INFO] [2024-11-30T23:58:23] Module name: ExpChooser
# # [INFO] [2024-11-30T23:58:23] Instrument: emos1
# # [INFO] [2024-11-30T23:58:23] Stream no.: 0001
# # [INFO] [2024-11-30T23:58:23] Module version number: 1.38
# # [INFO] [2024-11-30T23:58:23] Checking exposure S001 for processability
# # [INFO] [2024-11-30T23:58:23] Filter: CalClosed
# # [INFO] [2024-11-30T23:58:23] Instrument mode: PrimeFullWindow
# # [INFO] [2024-11-30T23:58:23] Exposure duration: 11802
# # [INFO] [2024-11-30T23:58:23] Exposure ignored due to invalid or unsupported filter
# # [INFO] [2024-11-30T23:58:23] Module name: ExpChooser
# # [INFO] [2024-11-30T23:58:23] Instrument: emos2
# # [INFO] [2024-11-30T23:58:23] Stream no.: 0001
# # [INFO] [2024-11-30T23:58:23] Module version number: 1.38
# # [INFO] [2024-11-30T23:58:23] Checking exposure S002 for processability
# # [INFO] [2024-11-30T23:58:23] Filter: CalClosed
# # [INFO] [2024-11-30T23:58:23] Instrument mode: PrimeFullWindow
# # [INFO] [2024-11-30T23:58:23] Exposure duration: 11779
# # [INFO] [2024-11-30T23:58:23] Exposure ignored due to invalid or unsupported filter
# # [INFO] [2024-11-30T23:58:23] Module name: ExpChooser
# # [INFO] [2024-11-30T23:58:23] Instrument: epn
# # [INFO] [2024-11-30T23:58:23] Stream no.: 0001
# # [INFO] [2024-11-30T23:58:23] Module version number: 1.38
# # [INFO] [2024-11-30T23:58:23] Checking exposure S003 for processability
# # [INFO] [2024-11-30T23:58:23] Filter: CalClosed
# # [INFO] [2024-11-30T23:58:23] Instrument mode: PrimeFullWindow
# # [INFO] [2024-11-30T23:58:23] Exposure duration: 9933
# # [INFO] [2024-11-30T23:58:23] Exposure ignored due to invalid or unsupported filter
# # [INFO] [2024-11-30T23:58:23] Module name: ExpChooser
# # [INFO] [2024-11-30T23:58:23] Instrument: epn
# # [INFO] [2024-11-30T23:58:23] Stream no.: 0002
# # [INFO] [2024-11-30T23:58:23] Module version number: 1.38
# # [INFO] [2024-11-30T23:58:23] Checking exposure U002 for processability
# # [INFO] [2024-11-30T23:58:23] Exposure ignored due to lack of event files
# # [INFO] [2024-11-30T23:58:23] Module name: ExpChooser
# # [INFO] [2024-11-30T23:58:23] Instrument: epn
# # [INFO] [2024-11-30T23:58:23] Stream no.: 0003
# # [INFO] [2024-11-30T23:58:23] Module version number: 1.38
# # [INFO] [2024-11-30T23:58:23] Checking exposure U003 for processability
# # [INFO] [2024-11-30T23:58:23] Exposure ignored due to lack of event files
# # [INFO] [2024-11-30T23:58:23] Module name: ExpChooser
# # [INFO] [2024-11-30T23:58:23] Instrument: epn
# # [INFO] [2024-11-30T23:58:23] Stream no.: 0004
# # [INFO] [2024-11-30T23:58:23] Module version number: 1.38
# # [INFO] [2024-11-30T23:58:23] Checking exposure U004 for processability
# # [INFO] [2024-11-30T23:58:23] Exposure ignored due to lack of event files
# # [INFO] [2024-11-30T23:58:23] Module name: ExpChooser
# # [INFO] [2024-11-30T23:58:23] Instrument: epn
# # [INFO] [2024-11-30T23:58:23] Stream no.: 0005
# # [INFO] [2024-11-30T23:58:23] Module version number: 1.38
# # [INFO] [2024-11-30T23:58:23] Checking exposure U005 for processability
# # [INFO] [2024-11-30T23:58:23] Exposure ignored due to lack of event files
# # [INFO] [2024-11-30T23:58:23] Module name: ExpChooser
# # [INFO] [2024-11-30T23:58:23] Instrument: epn
# # [INFO] [2024-11-30T23:58:23] Stream no.: 0006
# # [INFO] [2024-11-30T23:58:23] Module version number: 1.38
# # [INFO] [2024-11-30T23:58:23] Checking exposure U006 for processability
# # [INFO] [2024-11-30T23:58:23] Exposure ignored due to lack of event files
# # [INFO] [2024-11-30T23:58:23] Module name: ExpChooser
# # [INFO] [2024-11-30T23:58:23] Instrument: epn
# # [INFO] [2024-11-30T23:58:23] Stream no.: 0007
# # [INFO] [2024-11-30T23:58:23] Module version number: 1.38
# # [INFO] [2024-11-30T23:58:23] Checking exposure U007 for processability
# # [INFO] [2024-11-30T23:58:23] Exposure ignored due to lack of event files
# # [INFO] [2024-11-30T23:58:23] Module name: ExpChooser
# # [INFO] [2024-11-30T23:58:23] Instrument: epn
# # [INFO] [2024-11-30T23:58:23] Stream no.: 0008
# # [INFO] [2024-11-30T23:58:23] Module version number: 1.38
# # [INFO] [2024-11-30T23:58:23] Checking exposure U008 for processability
# # [INFO] [2024-11-30T23:58:23] Exposure ignored due to lack of event files
# # [INFO] [2024-11-30T23:58:23] Module name: ExpChooser
# # [INFO] [2024-11-30T23:58:23] Instrument: epn
# # [INFO] [2024-11-30T23:58:23] Stream no.: 0009
# # [INFO] [2024-11-30T23:58:23] Module version number: 1.38
# # [INFO] [2024-11-30T23:58:23] Checking exposure U009 for processability
# # [INFO] [2024-11-30T23:58:23] Exposure ignored due to lack of event files
# # [INFO] [2024-11-30T23:58:23] Module name: ExpChooser
# # [INFO] [2024-11-30T23:58:23] Instrument: epn
# # [INFO] [2024-11-30T23:58:23] Stream no.: 0010
# # [INFO] [2024-11-30T23:58:23] Module version number: 1.38
# # [INFO] [2024-11-30T23:58:23] Checking exposure U010 for processability
# # [INFO] [2024-11-30T23:58:23] Exposure ignored due to lack of event files
# # [INFO] [2024-11-30T23:58:23] Module name: ExpChooser
# # [INFO] [2024-11-30T23:58:23] Instrument: epn
# # [INFO] [2024-11-30T23:58:23] Stream no.: 0011
# # [INFO] [2024-11-30T23:58:23] Module version number: 1.38
# # [INFO] [2024-11-30T23:58:23] Checking exposure U011 for processability
# # [INFO] [2024-11-30T23:58:23] Exposure ignored due to lack of event files
# # [INFO] [2024-11-30T23:58:23] Module name: ExpChooser
# # [INFO] [2024-11-30T23:58:23] Instrument: epn
# # [INFO] [2024-11-30T23:58:23] Stream no.: 0012
# # [INFO] [2024-11-30T23:58:23] Module version number: 1.38
# # [INFO] [2024-11-30T23:58:23] Checking exposure U012 for processability
# # [INFO] [2024-11-30T23:58:23] Exposure ignored due to lack of event files
# # [INFO] [2024-11-30T23:58:23] Module name: ExpChooser
# # [INFO] [2024-11-30T23:58:23] Instrument: epn
# # [INFO] [2024-11-30T23:58:23] Stream no.: 0013
# # [INFO] [2024-11-30T23:58:23] Module version number: 1.38
# # [INFO] [2024-11-30T23:58:23] Checking exposure U013 for processability
# # [INFO] [2024-11-30T23:58:23] Exposure ignored due to lack of event files
# # [INFO] [2024-11-30T23:58:23] Module name: ExpChooser
# # [INFO] [2024-11-30T23:58:23] Instrument: epn
# # [INFO] [2024-11-30T23:58:23] Stream no.: 0014
# # [INFO] [2024-11-30T23:58:23] Module version number: 1.38
# # [INFO] [2024-11-30T23:58:23] Checking exposure U700 for processability
# # [INFO] [2024-11-30T23:58:23] Exposure ignored due to lack of event files
